Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E09
(371 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 228 8e-61
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 228 8e-61
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 228 8e-61
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 228 8e-61
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 3e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 133 3e-32
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 133 3e-32
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 120 4e-28
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 62 9e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 62 9e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 62 9e-11
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 59 1e-09
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 59 1e-09
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 54 2e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 50 4e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 2e-06
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 38 0.002
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 38 0.002
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 33 0.065
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 33 0.065
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.086
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.086
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.61
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.80
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.80
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 23 2.2
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.4
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 2.4
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 4.3
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 27 4.3
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 27 4.3
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 4.3
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 27 5.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 26 7.5
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 7.5
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 7.5
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 26 7.5
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 26 7.5
Z71178-4|CAA94877.1| 390|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 26 9.9
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 26 9.9
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 228 bits (558), Expect = 8e-61
Identities = 105/107 (98%), Positives = 106/107 (99%)
Frame = +2
Query: 50 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTS
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTS 107
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 228 bits (558), Expect = 8e-61
Identities = 105/107 (98%), Positives = 106/107 (99%)
Frame = +2
Query: 50 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTS
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTS 107
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 228 bits (558), Expect = 8e-61
Identities = 105/107 (98%), Positives = 106/107 (99%)
Frame = +2
Query: 50 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTS
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTS 107
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 228 bits (558), Expect = 8e-61
Identities = 105/107 (98%), Positives = 106/107 (99%)
Frame = +2
Query: 50 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTS
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTS 107
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 3e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +2
Query: 50 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAER 250
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 133 bits (322), Expect = 3e-32
Identities = 59/104 (56%), Positives = 77/104 (74%)
Frame = +2
Query: 59 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 238
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 239 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTS
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTS 270
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 133 bits (322), Expect = 3e-32
Identities = 59/104 (56%), Positives = 77/104 (74%)
Frame = +2
Query: 59 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 238
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 239 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTS
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTS 288
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 120 bits (288), Expect = 4e-28
Identities = 52/106 (49%), Positives = 75/106 (70%)
Frame = +2
Query: 53 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 232
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 233 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGAN 209
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 62.5 bits (145), Expect = 9e-11
Identities = 37/105 (35%), Positives = 52/105 (49%)
Frame = +2
Query: 56 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 236 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 134
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 62.5 bits (145), Expect = 9e-11
Identities = 37/105 (35%), Positives = 52/105 (49%)
Frame = +2
Query: 56 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 236 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 135
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 62.5 bits (145), Expect = 9e-11
Identities = 37/105 (35%), Positives = 52/105 (49%)
Frame = +2
Query: 56 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 236 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAA 135
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 58.8 bits (136), Expect = 1e-09
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +2
Query: 62 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 236 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
K E++RGITI++A +E+ + D PGH DFIKNMI GTS
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTS 130
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 58.8 bits (136), Expect = 1e-09
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +2
Query: 62 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 236 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTS 370
K E++RGITI++A +E+ + D PGH DFIKNMI GTS
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTS 130
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 54.4 bits (125), Expect = 2e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 254 RGITIDIALWKFETGKYYVTIIDAPGHRDF 343
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 50.4 bits (115), Expect = 4e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 254 RGITIDIALWKFETGKYYVTIIDAPGHRDF 343
RGITI A + + IID PGH DF
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDF 125
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.4 bits (110), Expect = 2e-06
Identities = 31/90 (34%), Positives = 42/90 (46%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 254 RGITIDIALWKFETGKYYVTIIDAPGHRDF 343
RGIT+ Y + +ID PGH DF
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 38.3 bits (85), Expect = 0.002
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 226
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 227 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDF 343
L+K E +G T+++ K + + + +ID+PGH DF
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 38.3 bits (85), Expect = 0.002
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 226
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 227 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDF 343
L+K E +G T+++ K + + + +ID+PGH DF
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.065
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 17 TALIVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 136
T + +IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 124 TEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 33.1 bits (72), Expect = 0.065
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 17 TALIVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 136
T + +IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 124 TEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.086
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 56 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 232
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 233 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 343
+ E+ RGIT+ + + +ID+PGH DF
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.7 bits (71), Expect = 0.086
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 56 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 232
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 233 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 343
+ E+ RGIT+ + + +ID+PGH DF
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.61
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 328 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 239
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.80
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 152 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.80
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 152 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 71 INIVVIGHVDSGKSTTT 121
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 71 INIVVIGHVDSGKSTTT 121
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 23.4 bits (48), Expect(2) = 2.2
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 197 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDF 343
GK + A ++ A GIT I + E K VT +D PGH F
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAF 217
Score = 23.0 bits (47), Expect(2) = 2.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 77 IVVIGHVDSGKST 115
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 221 WVLDKLKAERERGITIDIALWKFETGKYYVTII 319
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 221 WVLDKLKAERERGITIDIALWKFETGKYYVTII 319
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 221 WVLDKLKAERERGITIDIALWKFETGKYYVTII 319
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 27.5 bits (58), Expect = 3.2
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Frame = +2
Query: 26 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMG 199
+++R P+ ++ + + + V+G D GKST G L C G K I F + E+
Sbjct: 155 VLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVR 212
Query: 200 KGSFKYAWVLDKLKAERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITG 364
G K + V + + RG ++ A E VT+ID G + K I G
Sbjct: 213 TG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 44 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 202
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 44 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 202
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.1 bits (57), Expect = 4.3
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 254 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNM 355
+ + I + Y + IID PGH +F M
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 218
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.1 bits (57), Expect = 4.3
Identities = 22/94 (23%), Positives = 39/94 (41%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 254 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNM 355
+ + I + Y + IID PGH +F M
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEM 93
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 4.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 44 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 202
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 32 IRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY-KCGGIDKRTIEKFEKEAQEMGK 202
IR+ K+GK K+ + ++ D GKS +L + G D +F+ ++GK
Sbjct: 11 IREAWKLGKNKIFLRACILYEYDQGKSVYESYLSFCDAVGDDFMEYREFDFWYYKLGK 68
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 26.2 bits (55), Expect = 7.5
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 281 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTS 370
++ E G+ V IID+ G RDFI KN+ GT+
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGTA 95
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 26.2 bits (55), Expect = 7.5
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 102 PASPQQLVT*STNAVVSTNVPSKSS 176
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 259 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 360
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 259 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 360
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>Z71178-4|CAA94877.1| 390|Caenorhabditis elegans Hypothetical
protein B0024.4 protein.
Length = 390
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 126 T*STNAVVSTNVPSKSSRRKPRKWVRVPSNTLGYWT 233
T N V S + S P KWV +P+N + W+
Sbjct: 278 TIGVNVVGSVPANANFSVTYPIKWVTIPTNIIQSWS 313
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 25.8 bits (54), Expect = 9.9
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 215 YAWVLDKLK---AERERGITIDIALWKFETGKYYVTIIDAPGH 334
Y W+LD + A + R ++ + + + E+GK ++I PGH
Sbjct: 32 YPWLLDFINNRSATQTRNLSANTVVHQAESGKTELSISFLPGH 74
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 25.8 bits (54), Expect = 9.9
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 215 YAWVLDKLK---AERERGITIDIALWKFETGKYYVTIIDAPGH 334
Y W+LD + A + R ++ + + + E+GK ++I PGH
Sbjct: 78 YPWLLDFINNRSATQTRNLSANTVVHQAESGKTELSISFLPGH 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,793,595
Number of Sequences: 27780
Number of extensions: 174145
Number of successful extensions: 603
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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