Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_E07
         (181 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    19   5.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   5.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   7.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    18   9.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    18   9.6  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     18   9.6  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 60  EIFPISSKPKPILQP 16
           E+ P+S+ P+P   P
Sbjct: 366 EVIPLSAIPEPSKNP 380


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 108 SNMNIINLLYVHTK*LDLIINL 173
           SN   I+ L  H K  DLI+ L
Sbjct: 252 SNKGSISKLQFHNKDDDLILTL 273


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 5   VDPPGCRIG 31
           VDP GC  G
Sbjct: 402 VDPAGCNAG 410


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 62  MKYFLFLLNL 33
           +KY LFL NL
Sbjct: 915 VKYHLFLTNL 924


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 62  MKYFLFLLNL 33
           +KY LFL NL
Sbjct: 953 VKYHLFLTNL 962


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 181 TKNKLIIRSSHLVCTYNKFI 122
           TKNKLI  S  +    N+ I
Sbjct: 193 TKNKLIEESKTVFILNNEII 212


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,139
Number of Sequences: 438
Number of extensions: 805
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)