Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E06
(416 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456382-1|CAG30268.1| 516|Homo sapiens ARFGAP1 protein. 38 0.010
BC005122-1|AAH05122.1| 516|Homo sapiens ADP-ribosylation factor... 38 0.010
AL159143-1|CAB76901.1| 516|Homo sapiens hypothetical protein pr... 38 0.010
AL137598-1|CAB70834.1| 473|Homo sapiens hypothetical protein pr... 38 0.010
AL049758-3|CAI20950.1| 516|Homo sapiens ADP-ribosylation factor... 38 0.010
AL049757-1|CAI21510.1| 516|Homo sapiens ADP-ribosylation factor... 38 0.010
AK022768-1|BAB14236.1| 262|Homo sapiens protein ( Homo sapiens ... 38 0.010
AK002083-1|BAA92076.1| 262|Homo sapiens protein ( Homo sapiens ... 38 0.010
AF111847-1|AAF40310.1| 516|Homo sapiens ARFGAP1 protein protein. 38 0.010
BC030148-1|AAH30148.1| 521|Homo sapiens zinc finger protein 289... 35 0.13
AL834337-1|CAD39004.1| 518|Homo sapiens hypothetical protein pr... 35 0.13
AK027482-1|BAB55144.1| 521|Homo sapiens protein ( Homo sapiens ... 35 0.13
AB073358-1|BAE45716.1| 481|Homo sapiens putative protein produc... 35 0.13
>CR456382-1|CAG30268.1| 516|Homo sapiens ARFGAP1 protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 493 RSVAGKLSVFANGVVTSIQDRYG 515
>BC005122-1|AAH05122.1| 516|Homo sapiens ADP-ribosylation factor
GTPase activating protein 3 protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 493 RSVAGKLSVFANGVVTSIQDRYG 515
>AL159143-1|CAB76901.1| 516|Homo sapiens hypothetical protein
protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 493 RSVAGKLSVFANGVVTSIQDRYG 515
>AL137598-1|CAB70834.1| 473|Homo sapiens hypothetical protein
protein.
Length = 473
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 450 RSVAGKLSVFANGVVTSIQDRYG 472
>AL049758-3|CAI20950.1| 516|Homo sapiens ADP-ribosylation factor
GTPase activating proteinaf1-like protein 3 (PYPAF3)
protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 493 RSVAGKLSVFANGVVTSIQDRYG 515
>AL049757-1|CAI21510.1| 516|Homo sapiens ADP-ribosylation factor
GTPase activating proteinta 2 protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 493 RSVAGKLSVFANGVVTSIQDRYG 515
>AK022768-1|BAB14236.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ12706 fis, clone NT2RP1000902, weakly similar to
HYPOTHETICAL 127.4 KD PROTEIN F07F6.4 IN CHROMOSOME III.
).
Length = 262
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 239 RSVAGKLSVFANGVVTSIQDRYG 261
>AK002083-1|BAA92076.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ11221 fis, clone PLACE1008132. ).
Length = 262
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 239 RSVAGKLSVFANGVVTSIQDRYG 261
>AF111847-1|AAF40310.1| 516|Homo sapiens ARFGAP1 protein protein.
Length = 516
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
R VAG+LS ANGVV+SIQ+RYG
Sbjct: 493 RSVAGKLSVFANGVVTSIQDRYG 515
>BC030148-1|AAH30148.1| 521|Homo sapiens zinc finger protein 289,
ID1 regulated protein.
Length = 521
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
+ VAG+++ LANGV++S+Q+RYG
Sbjct: 497 KSVAGKMAVLANGVMNSLQDRYG 519
>AL834337-1|CAD39004.1| 518|Homo sapiens hypothetical protein
protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
+ VAG+++ LANGV++S+Q+RYG
Sbjct: 494 KSVAGKMAVLANGVMNSLQDRYG 516
>AK027482-1|BAB55144.1| 521|Homo sapiens protein ( Homo sapiens
cDNA FLJ14576 fis, clone NT2RM4001092, weakly similar to
ZINC FINGER PROTEIN GLO3. ).
Length = 521
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
+ VAG+++ LANGV++S+Q+RYG
Sbjct: 497 KSVAGKMAVLANGVMNSLQDRYG 519
>AB073358-1|BAE45716.1| 481|Homo sapiens putative protein product
of Nbla10535 protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.13
Identities = 13/23 (56%), Positives = 21/23 (91%)
Frame = +1
Query: 4 RGVAGRLSSLANGVVSSIQERYG 72
+ VAG+++ LANGV++S+Q+RYG
Sbjct: 457 KSVAGKMAVLANGVMNSLQDRYG 479
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,815,324
Number of Sequences: 237096
Number of extensions: 825462
Number of successful extensions: 5372
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5370
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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