Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E05
(157 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 20 3.2
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 20 3.2
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 20 3.2
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 20 3.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 19 5.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 19 5.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 19 5.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 19 5.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 5.6
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 19 5.6
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 18 9.8
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 18 9.8
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 18 9.8
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 18 9.8
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -3
Query: 77 IDTPTHRSIVQNI 39
ID P HR ++N+
Sbjct: 90 IDAPGHRDFIKNM 102
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -3
Query: 77 IDTPTHRSIVQNI 39
ID P HR ++N+
Sbjct: 17 IDAPGHRDFIKNM 29
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -3
Query: 77 IDTPTHRSIVQNI 39
ID P HR ++N+
Sbjct: 33 IDAPGHRDFIKNM 45
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -3
Query: 77 IDTPTHRSIVQNI 39
ID P HR ++N+
Sbjct: 90 IDAPGHRDFIKNM 102
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +1
Query: 94 IWVNEEGRIR 123
+W N+EG +R
Sbjct: 217 VWKNDEGTLR 226
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +1
Query: 94 IWVNEEGRIR 123
+W N+EG +R
Sbjct: 217 VWKNDEGTLR 226
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +1
Query: 94 IWVNEEGRIR 123
+W N+EG +R
Sbjct: 268 VWKNDEGTLR 277
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +1
Query: 94 IWVNEEGRIR 123
+W N+EG +R
Sbjct: 217 VWKNDEGTLR 226
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 125 YLILPSSFTHI 93
YL+LPS HI
Sbjct: 157 YLVLPSGELHI 167
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 91 IIWVNEEGRIR 123
++W NEE +R
Sbjct: 218 LVWCNEEDHLR 228
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 133 VYCTLFFPPHLPILCA 86
+YC L + ILC+
Sbjct: 12 IYCALVHADTVAILCS 27
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -1
Query: 133 VYCTLFFPPHLPILCA 86
+YC L + ILC+
Sbjct: 12 IYCALVHADTVAILCS 27
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 47 GQCCGELGYLL 79
GQC E GY+L
Sbjct: 180 GQCGREDGYIL 190
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 18.2 bits (35), Expect = 9.8
Identities = 5/17 (29%), Positives = 11/17 (64%)
Frame = -3
Query: 137 QCILYLILPSSFTHIMR 87
+C+ ++L S H++R
Sbjct: 610 RCVKGILLKSGLYHVLR 626
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,514
Number of Sequences: 438
Number of extensions: 1099
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used: 2655300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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