Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_E04
(306 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 27 0.069
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 24 0.37
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 0.48
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 0.48
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 1.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 3.4
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 4.5
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 20 7.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 20 7.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 20 7.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 7.9
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 26.6 bits (56), Expect = 0.069
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 152 NQSGHNKNSATYITKGIHVEHNISKSTQHVTNKSLSDSVTKTSIE 286
N+S + +NS T+ + +HN + TQ++ S S+ KT I+
Sbjct: 370 NESENRRNSCLGSTETYYSKHNTQQFTQYIPESS-SNLQEKTKID 413
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 24.2 bits (50), Expect = 0.37
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 151 IHNISFAGIYTRVIG 107
+H++ F G YT VIG
Sbjct: 370 VHDVEFPGXYTMVIG 384
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.8 bits (49), Expect = 0.48
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 20 NVNSRITQHSTSNNQD-IKQSGTHTQRVVSSDHSGVNSSE 136
N N ++ +S S++++ +KQ + + +SS S ++SSE
Sbjct: 343 NSNQIVSDNSLSSSEEKLKQDILNLRTDISSSSSSISSSE 382
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 0.48
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 211 FYVDSFCYICRRIFVMPTLVIHNISFAGIYTRV 113
++ ++FCY R V HN+S + RV
Sbjct: 533 WFQNTFCYFRRNAATWKNAVRHNLSLHKCFMRV 565
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 1.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1
Query: 210 STWIPFVIYVAEFLLCPLWLS 148
+TW F +++ L C +WL+
Sbjct: 123 ATWEVFKVWIFGDLWCSIWLA 143
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.0 bits (42), Expect = 3.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 189 IYVAEFLLCPLWLSTIYLSLE 127
IY +F+ +W T+Y+S E
Sbjct: 87 IYGGQFVRDLIWTPTVYVSNE 107
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 20.6 bits (41), Expect = 4.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 92 GYECLTV*CLGY 57
G +CLTV CL +
Sbjct: 384 GIQCLTVVCLAF 395
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 19.8 bits (39), Expect = 7.9
Identities = 6/24 (25%), Positives = 16/24 (66%)
Frame = +2
Query: 107 SDHSGVNSSERYIVDNQSGHNKNS 178
+ ++G +++ DNQ+ +N+N+
Sbjct: 424 NQNAGNQNADNQNADNQNANNQNA 447
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/44 (20%), Positives = 18/44 (40%)
Frame = +2
Query: 110 DHSGVNSSERYIVDNQSGHNKNSATYITKGIHVEHNISKSTQHV 241
DH+ + R+ V + H+K T + + + QH+
Sbjct: 343 DHAPKQTEVRFKVHDPKAHSKGGTLENTINGRADEEAAPAPQHL 386
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/44 (20%), Positives = 18/44 (40%)
Frame = +2
Query: 110 DHSGVNSSERYIVDNQSGHNKNSATYITKGIHVEHNISKSTQHV 241
DH+ + R+ V + H+K T + + + QH+
Sbjct: 343 DHAPKQTEVRFKVHDPKAHSKGGTLENTINGRADEEAAPAPQHL 386
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +2
Query: 71 KQSGTHTQRVVSSDHSGVNSSERYIVDNQSGHNKNS 178
++S T+R S + ++S + N S +N N+
Sbjct: 303 ERSRDKTERERSKERKIISSLSNNYISNISNYNNNN 338
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,088
Number of Sequences: 438
Number of extensions: 1922
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6493812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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