Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_E02
         (187 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...    35   0.054
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.        35   0.054
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...    35   0.054
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...    35   0.054
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...    35   0.054
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.        35   0.054
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...    35   0.054
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...    35   0.054
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...    35   0.054

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score = 34.7 bits (76), Expect = 0.054
 Identities = 13/19 (68%), Positives = 18/19 (94%)
 Frame = +3

Query: 129 EDVGLCFKTPREAVEGTYI 185
           +++GL FKTP+EA+EGTYI
Sbjct: 38  KNIGLGFKTPKEAIEGTYI 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,254,107
Number of Sequences: 237096
Number of extensions: 484056
Number of successful extensions: 1005
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 76,859,062
effective HSP length: 41
effective length of database: 67,138,126
effective search space used: 1342762520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)