Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_E01
         (267 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   1.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   1.1  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   1.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   1.9  
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    22   4.5  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    22   4.5  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           21   7.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   7.8  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 155 VGISTSYSFNSSHSKHNFTLAIN 87
           V +   YS+N +H K+NF    N
Sbjct: 338 VFVDLVYSYNMAHDKNNFVRPAN 360


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 155 VGISTSYSFNSSHSKHNFTLAIN 87
           V +   YS+N +H K+NF    N
Sbjct: 338 VFVDLVYSYNMAHDKNNFVRPAN 360


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 30  CLL*SQTNFSIFFVL*ITNIDGKRKVMFAM 119
           C L   TNF I F+L   +    RK +F M
Sbjct: 414 CQLFFMTNFGINFILYCVSGQNFRKAIFGM 443


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 224 RNCYSHVQTPGN 259
           RNC++ +QTP N
Sbjct: 667 RNCHTQIQTPEN 678


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 217 SYSVHSPARLSRSISAFF 164
           +YSV     LSRSI  FF
Sbjct: 109 TYSVRMGPHLSRSIPCFF 126


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 214 YSVHSPARLSRSISAFFNTMLEYRRPTPLIAVIANITLR 98
           YSV SP+      S ++  +  +    P+I V   I LR
Sbjct: 85  YSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLR 123


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +2

Query: 107 YVCYDCY*RSRTSIFQHCVEKGGYR 181
           Y C + + R R     HC +  G R
Sbjct: 141 YCCRESFLRERQLQLTHCYDPDGVR 165


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 76   HNTKNMLKFVWDHKRHC 26
            HNT N++    DH   C
Sbjct: 3102 HNTSNIIGITEDHYSSC 3118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,960
Number of Sequences: 2352
Number of extensions: 4277
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 14857014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)