Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_D24
(586 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-9|CAB03002.1| 132|Caenorhabditis elegans Hypothetical pr... 100 7e-22
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 28 4.2
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 27 7.4
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 27 7.4
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 27 7.4
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 27 7.4
AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode poly... 27 7.4
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 27 7.4
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei... 27 7.4
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z81070-9|CAB03002.1| 132|Caenorhabditis elegans Hypothetical
protein F26E4.9 protein.
Length = 132
Score = 100 bits (240), Expect = 7e-22
Identities = 45/88 (51%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 135 PDPLEHATGLERRELMAMQAGNDDPFNMKVLKKA-AGTRESPTLVPSCFDARIVGCICEE 311
PDPLEHATG E++ L+A AG DD + KV +A A T++ P LVPS +D RI+GC+CE+
Sbjct: 40 PDPLEHATGREKKMLLARLAG-DDRYEPKVYYRAEASTKQKPNLVPSHYDFRIIGCMCEQ 98
Query: 312 HATAVTWLWLHKDHPRRCECGHWYKLVE 395
+ V ++ + K P+RCECGHW+K V+
Sbjct: 99 DSGHVNFMTIRKGDPKRCECGHWFKGVD 126
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 120 ADKMMPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRE 251
A ++ PD E GLE + + QAG D + + +K+ A RE
Sbjct: 351 ATEVNPDHREAKEGLEHAKRLKTQAGKRDYYKILGVKRNASKRE 394
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 332 PSDSCSVFFTYASDNTRIKTRRHEG-GAFTSSSSLLQHFHVEGI 204
P+ +C F TYA + + + +EG A T + L F + GI
Sbjct: 422 PTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGI 465
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 332 PSDSCSVFFTYASDNTRIKTRRHEG-GAFTSSSSLLQHFHVEGI 204
P+ +C F TYA + + + +EG A T + L F + GI
Sbjct: 422 PTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGI 465
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 332 PSDSCSVFFTYASDNTRIKTRRHEGGAFTSSS 237
PS SC + YAS+ R R HE TS++
Sbjct: 17 PSSSCDIKSIYASEKVREAIRDHEQTIATSTA 48
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 332 PSDSCSVFFTYASDNTRIKTRRHEGGAFTSSS 237
PS SC + YAS+ R R HE TS++
Sbjct: 17 PSSSCDIKSIYASEKVREAIRDHEQTIATSTA 48
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 39 KMASLCRQIYKVNAFRSVLLPIARRGYADKMMPDPLEHATGLE 167
KM ++C ++YK ++ R + A + + M P+ L H T L+
Sbjct: 627 KMLTVCGEVYKDSSRRRREIEPAFQDFVKWMTPEQLGHITALK 669
>AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform c
protein.
Length = 1198
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 39 KMASLCRQIYKVNAFRSVLLPIARRGYADKMMPDPLEHATGLE 167
KM ++C ++YK ++ R + A + + M P+ L H T L+
Sbjct: 385 KMLTVCGEVYKDSSRRRREIEPAFQDFVKWMTPEQLGHITALK 427
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a
protein.
Length = 1440
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 39 KMASLCRQIYKVNAFRSVLLPIARRGYADKMMPDPLEHATGLE 167
KM ++C ++YK ++ R + A + + M P+ L H T L+
Sbjct: 627 KMLTVCGEVYKDSSRRRREIEPAFQDFVKWMTPEQLGHITALK 669
>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
protein.
Length = 1198
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 39 KMASLCRQIYKVNAFRSVLLPIARRGYADKMMPDPLEHATGLE 167
KM ++C ++YK ++ R + A + + M P+ L H T L+
Sbjct: 384 KMLTVCGEVYKDSSRRRREIEPAFQDFVKWMTPEQLGHITALK 426
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = -2
Query: 570 CIDSGN*KLTHLSFNIYIAYGNTVCNRNERLCALLMRIYNGCITTGSKLNFFVFIRTASR 391
C +SG T S + + T C RNE LC + + T K V + +
Sbjct: 1896 CQNSGTCNSTTQSCDCIDYFSGTYCERNENLCETNLVVCKNGGTCNPKTGLCVCLPDYTG 1955
Query: 390 PICTSVRIHS 361
C + +IHS
Sbjct: 1956 DYCDN-QIHS 1964
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,170,587
Number of Sequences: 27780
Number of extensions: 313576
Number of successful extensions: 658
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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