Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D24
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.41 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.41 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   5.1  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   8.9  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   8.9  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   8.9  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   8.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -1

Query: 322 AVACSSHMH---PTIRASKQDGTRVGLSRVPAAFFSTFML 212
           AVAC    H   P +RAS ++ T + L+ V   + +TF+L
Sbjct: 532 AVACLLFHHRDTPVVRASGRELTIILLAGVLVCYLNTFLL 571


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -1

Query: 322 AVACSSHMH---PTIRASKQDGTRVGLSRVPAAFFSTFML 212
           AVAC    H   P +RAS ++ T + L+ V   + +TF+L
Sbjct: 622 AVACLLFHHRDTPVVRASGRELTIILLAGVLVCYLNTFLL 661


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 549 FNYQNRYNY 575
           +NY N+YNY
Sbjct: 98  YNYNNKYNY 106


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/51 (21%), Positives = 18/51 (35%)
 Frame = +3

Query: 60  QIYKVNAFRSVLLPIARRGYADKMMPDPLEHATGLERRELMAMQAGNDDPF 212
           Q Y +N    + +P+    Y     P PL     ++ +       G   PF
Sbjct: 111 QYYNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHIGPSTPF 161


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/51 (21%), Positives = 18/51 (35%)
 Frame = +3

Query: 60  QIYKVNAFRSVLLPIARRGYADKMMPDPLEHATGLERRELMAMQAGNDDPF 212
           Q Y +N    + +P+    Y     P PL     ++ +       G   PF
Sbjct: 111 QYYNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHIGPSTPF 161


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/51 (21%), Positives = 18/51 (35%)
 Frame = +3

Query: 60  QIYKVNAFRSVLLPIARRGYADKMMPDPLEHATGLERRELMAMQAGNDDPF 212
           Q Y +N    + +P+    Y     P PL     ++ +       G   PF
Sbjct: 111 QYYNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHIGPSTPF 161


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/51 (21%), Positives = 18/51 (35%)
 Frame = +3

Query: 60  QIYKVNAFRSVLLPIARRGYADKMMPDPLEHATGLERRELMAMQAGNDDPF 212
           Q Y +N    + +P+    Y     P PL     ++ +       G   PF
Sbjct: 111 QYYNINYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIPRFRHIGPSTPF 161


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,195
Number of Sequences: 438
Number of extensions: 3836
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)