Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D23
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    26   0.23 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    26   0.23 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    26   0.23 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.2  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   3.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   6.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   8.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 202 PSLLSPGTPCQLRR 161
           P  L PGTPCQL R
Sbjct: 179 PEELEPGTPCQLTR 192


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 202 PSLLSPGTPCQLRR 161
           P  L PGTPCQL R
Sbjct: 179 PEELEPGTPCQLTR 192


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 202 PSLLSPGTPCQLRR 161
           P  L PGTPCQL R
Sbjct: 179 PEELEPGTPCQLTR 192


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 407  TPSDPGSRGRWTPSQPS 457
            T   P  RGR+TP QP+
Sbjct: 987  TDPSPFKRGRYTPPQPA 1003


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 441 RRHSHRHGSAGLFGRPAPQTQRIRS 515
           +RHS  H S G + R A + Q +RS
Sbjct: 195 QRHSTIHLSTGNYSRLACEIQFVRS 219


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 174 QGVPGDSKLGTPGRSYCEATPDSWWFRESLHHTD 275
           Q   GDS +G    S C +T  S      L H D
Sbjct: 618 QAALGDSNMGFLNNSMCTSTTTSPDKEHVLAHND 651


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 524 TRTNHISRNWNAS 562
           T+TN ISR +NAS
Sbjct: 741 TKTNRISRIFNAS 753


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 505 EYEAGVYAYKPHIEE 549
           EY+  +  YKP +EE
Sbjct: 171 EYKPEIMEYKPDVEE 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,823
Number of Sequences: 438
Number of extensions: 3426
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)