Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D22
         (179 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132877-1|AAI32878.1|  608|Homo sapiens KIAA1822 protein.             27   8.2  
AY358173-1|AAQ88540.1|  608|Homo sapiens ARAR9245 protein.             27   8.2  
AB058725-1|BAB47451.1|  533|Homo sapiens KIAA1822 protein protein.     27   8.2  

>BC132877-1|AAI32878.1|  608|Homo sapiens KIAA1822 protein.
          Length = 608

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 166 LLKKYFPYLIDFHGDKVIELYII 98
           L+  Y+PY+I F  D+  ELY +
Sbjct: 533 LINNYYPYIISFGEDEAGELYFM 555


>AY358173-1|AAQ88540.1|  608|Homo sapiens ARAR9245 protein.
          Length = 608

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 166 LLKKYFPYLIDFHGDKVIELYII 98
           L+  Y+PY+I F  D+  ELY +
Sbjct: 533 LINNYYPYIISFGEDEAGELYFM 555


>AB058725-1|BAB47451.1|  533|Homo sapiens KIAA1822 protein protein.
          Length = 533

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 166 LLKKYFPYLIDFHGDKVIELYII 98
           L+  Y+PY+I F  D+  ELY +
Sbjct: 284 LINNYYPYIISFGEDEAGELYFM 306


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,010,976
Number of Sequences: 237096
Number of extensions: 347184
Number of successful extensions: 595
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 76,859,062
effective HSP length: 39
effective length of database: 67,612,318
effective search space used: 1352246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)