Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D20
         (140 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   0.58 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   0.58 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   0.58 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   5.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   7.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   7.2  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 0.58
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 134 DQILFTINFTTPTKLLK*LF 75
           D  +FT N T  T LLK L+
Sbjct: 206 DATVFTYNITNSTPLLKKLY 225


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 0.58
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 134 DQILFTINFTTPTKLLK*LF 75
           D  +FT N T  T LLK L+
Sbjct: 221 DATVFTYNITNSTPLLKKLY 240


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 0.58
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 134 DQILFTINFTTPTKLLK*LF 75
           D  +FT N T  T LLK L+
Sbjct: 109 DATVFTYNITNSTPLLKKLY 128


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 36  NRKRPTPRAVY 4
           NR+RP P  V+
Sbjct: 514 NRRRPNPGTVF 524


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 1   EIYGTRCRSFAILT 42
           +I+G RCR+   LT
Sbjct: 203 QIHGYRCRTMHRLT 216


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 1   EIYGTRCRSFAILT 42
           +I+G RCR+   LT
Sbjct: 203 QIHGYRCRTMHRLT 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,398
Number of Sequences: 438
Number of extensions: 420
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 27
effective length of database: 134,517
effective search space used:  2555823
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)