Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_D19
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 2.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 2.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 2.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 2.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 2.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 2.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 2.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 2.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 2.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 2.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 2.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 2.7
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 2.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 2.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 2.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 2.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 2.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 2.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 2.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 2.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 2.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 2.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 2.7
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 2.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.2
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYEIRRIREIEKL 75
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 97 LMKNFLTEYDYLKLREKQKV 156
LMK + EY+ ++RE +K+
Sbjct: 56 LMKKMILEYELRRIREIEKL 75
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.2 bits (45), Expect = 2.7
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 74 INIIINRSKNNLFINLS 24
++++IN SKNN +++S
Sbjct: 503 VSLLINFSKNNTIVDIS 519
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 QIKRKTKSSFFPLSIGCI 185
QI+R+T FF L + C+
Sbjct: 189 QIRRRTLYYFFNLIVPCV 206
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 QIKRKTKSSFFPLSIGCI 185
QI+R+T FF L + C+
Sbjct: 189 QIRRRTLYYFFNLIVPCV 206
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 QIKRKTKSSFFPLSIGCI 185
QI+R+T FF L + C+
Sbjct: 189 QIRRRTLYYFFNLIVPCV 206
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 QIKRKTKSSFFPLSIGCI 185
QI+R+T FF L + C+
Sbjct: 189 QIRRRTLYYFFNLIVPCV 206
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 QIKRKTKSSFFPLSIGCI 185
QI+R+T FF L + C+
Sbjct: 189 QIRRRTLYYFFNLIVPCV 206
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 QIKRKTKSSFFPLSIGCI 185
QI+R+T FF L + C+
Sbjct: 189 QIRRRTLYYFFNLIVPCV 206
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 QIKRKTKSSFFPLSIGCI 185
QI+R+T FF L + C+
Sbjct: 257 QIRRRTLYYFFNLIVPCV 274
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 QIKRKTKSSFFPLSIGCI 185
QI+R+T FF L + C+
Sbjct: 257 QIRRRTLYYFFNLIVPCV 274
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,693
Number of Sequences: 438
Number of extensions: 1844
Number of successful extensions: 34
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -