Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_D13
(294 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98743-1|CAA67295.1| 610|Homo sapiens RNA helicase protein. 50 2e-06
BC024739-1|AAH24739.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 50 2e-06
BC003360-1|AAH03360.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 50 2e-06
BC001238-1|AAH01238.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 50 2e-06
AK091227-1|BAC03616.1| 408|Homo sapiens protein ( Homo sapiens ... 50 2e-06
AK001467-1|BAA91709.1| 670|Homo sapiens protein ( Homo sapiens ... 50 2e-06
AC009404-1|AAX88947.1| 546|Homo sapiens unknown protein. 50 2e-06
AB209392-1|BAD92629.1| 246|Homo sapiens Hypothetical protein FL... 50 2e-06
CR457060-1|CAG33341.1| 610|Homo sapiens DDX18 protein. 47 1e-05
>X98743-1|CAA67295.1| 610|Homo sapiens RNA helicase protein.
Length = 610
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K EP+YVGVDD + LEQ + C K + + +MVF
Sbjct: 312 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 371
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 372 FSSCMSVKYHYELLNYI 388
>BC024739-1|AAH24739.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K EP+YVGVDD + LEQ + C K + + +MVF
Sbjct: 372 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 431
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 432 FSSCMSVKYHYELLNYI 448
>BC003360-1|AAH03360.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K EP+YVGVDD + LEQ + C K + + +MVF
Sbjct: 372 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 431
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 432 FSSCMSVKYHYELLNYI 448
>BC001238-1|AAH01238.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K EP+YVGVDD + LEQ + C K + + +MVF
Sbjct: 372 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 431
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 432 FSSCMSVKYHYELLNYI 448
>AK091227-1|BAC03616.1| 408|Homo sapiens protein ( Homo sapiens
cDNA FLJ33908 fis, clone CTONG2008518, highly similar to
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 18. ).
Length = 408
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K EP+YVGVDD + LEQ + C K + + +MVF
Sbjct: 110 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 169
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 170 FSSCMSVKYHYELLNYI 186
>AK001467-1|BAA91709.1| 670|Homo sapiens protein ( Homo sapiens
cDNA FLJ10605 fis, clone NT2RP2005126, highly similar to
H.sapiens mRNA for RNA helicase. ).
Length = 670
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K EP+YVGVDD + LEQ + C K + + +MVF
Sbjct: 372 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 431
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 432 FSSCMSVKYHYELLNYI 448
>AC009404-1|AAX88947.1| 546|Homo sapiens unknown protein.
Length = 546
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K EP+YVGVDD + LEQ + C K + + +MVF
Sbjct: 248 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 307
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 308 FSSCMSVKYHYELLNYI 324
>AB209392-1|BAD92629.1| 246|Homo sapiens Hypothetical protein
FLJ33908 variant protein.
Length = 246
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K EP+YVGVDD + LEQ + C K + + +MVF
Sbjct: 32 EDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 91
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 92 FSSCMSVKYHYELLNYI 108
>CR457060-1|CAG33341.1| 610|Homo sapiens DDX18 protein.
Length = 610
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +1
Query: 46 EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
E + +K P+YVGVDD + LEQ + C K + + +MVF
Sbjct: 312 EDLARISLKKGPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVF 371
Query: 220 FSTCMSVKYHHELVQLI 270
FS+CMSVKYH+EL+ I
Sbjct: 372 FSSCMSVKYHYELLNYI 388
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,842,880
Number of Sequences: 237096
Number of extensions: 758953
Number of successful extensions: 1132
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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