Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D13
         (294 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U84552-1|AAC27683.1|  663|Drosophila melanogaster helicase pitch...    53   5e-08
AY119620-1|AAM50274.1|  680|Drosophila melanogaster LD46167p pro...    53   5e-08
AY071402-1|AAL49024.1|  680|Drosophila melanogaster RE48840p pro...    53   5e-08
AE014297-3091|AAN13900.2|  680|Drosophila melanogaster CG6375-PB...    53   5e-08
AE014297-3090|AAF55951.2|  680|Drosophila melanogaster CG6375-PA...    53   5e-08

>U84552-1|AAC27683.1|  663|Drosophila melanogaster helicase
           pitchoune protein.
          Length = 663

 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +1

Query: 46  EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
           E   +  +K EP+YVGV D++D      LEQ  I C   K    +           VMVF
Sbjct: 363 EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVF 422

Query: 220 FSTCMSVKYHHELVQLISXLACNVY 294
           FS+CMSVKYHHEL   I     +++
Sbjct: 423 FSSCMSVKYHHELFNYIDLPVTSIH 447


>AY119620-1|AAM50274.1|  680|Drosophila melanogaster LD46167p
           protein.
          Length = 680

 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +1

Query: 46  EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
           E   +  +K EP+YVGV D++D      LEQ  I C   K    +           VMVF
Sbjct: 380 EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVF 439

Query: 220 FSTCMSVKYHHELVQLISXLACNVY 294
           FS+CMSVKYHHEL   I     +++
Sbjct: 440 FSSCMSVKYHHELFNYIDLPVTSIH 464


>AY071402-1|AAL49024.1|  680|Drosophila melanogaster RE48840p
           protein.
          Length = 680

 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +1

Query: 46  EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
           E   +  +K EP+YVGV D++D      LEQ  I C   K    +           VMVF
Sbjct: 380 EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVF 439

Query: 220 FSTCMSVKYHHELVQLISXLACNVY 294
           FS+CMSVKYHHEL   I     +++
Sbjct: 440 FSSCMSVKYHHELFNYIDLPVTSIH 464


>AE014297-3091|AAN13900.2|  680|Drosophila melanogaster CG6375-PB,
           isoform B protein.
          Length = 680

 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +1

Query: 46  EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
           E   +  +K EP+YVGV D++D      LEQ  I C   K    +           VMVF
Sbjct: 380 EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVF 439

Query: 220 FSTCMSVKYHHELVQLISXLACNVY 294
           FS+CMSVKYHHEL   I     +++
Sbjct: 440 FSSCMSVKYHHELFNYIDLPVTSIH 464


>AE014297-3090|AAF55951.2|  680|Drosophila melanogaster CG6375-PA,
           isoform A protein.
          Length = 680

 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +1

Query: 46  EGSIQFGIKHEPVYVGVDDHRDRPR*F-LEQD-I*CALRKTYDGVIYISXXXXXXXVMVF 219
           E   +  +K EP+YVGV D++D      LEQ  I C   K    +           VMVF
Sbjct: 380 EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVF 439

Query: 220 FSTCMSVKYHHELVQLISXLACNVY 294
           FS+CMSVKYHHEL   I     +++
Sbjct: 440 FSSCMSVKYHHELFNYIDLPVTSIH 464


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,795,546
Number of Sequences: 53049
Number of extensions: 236452
Number of successful extensions: 344
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 506778984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)