Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_D12
(273 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 119 3e-28
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 117 1e-27
02_04_0017 + 18937774-18937864,18938505-18940945 116 2e-27
01_06_0662 + 30987187-30987277,30987825-30990214 113 2e-26
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 60 2e-10
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 57 2e-09
03_05_0511 + 25056018-25059107 42 7e-05
12_01_0373 + 2897874-2898911 27 2.0
09_02_0051 - 3606453-3606473,3606562-3606957,3608250-3608419,360... 27 2.0
11_06_0678 + 26166476-26166660,26166753-26166807,26166925-261670... 27 2.7
01_01_1055 + 8342761-8342822,8343374-8343791,8343867-8344096,834... 27 2.7
03_05_0614 - 26129627-26129784,26130110-26130282,26131236-261312... 26 3.6
10_05_0014 + 8018021-8019049 26 4.7
09_02_0052 - 3616013-3616033,3616116-3616514,3617925-3618094,361... 26 4.7
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 26 4.7
03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536... 26 4.7
12_02_0645 + 21475126-21475293,21475386-21475538,21478101-214782... 25 6.3
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 25 6.3
08_02_0099 + 12343518-12343678,12344193-12344393,12344669-123448... 25 6.3
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 25 6.3
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278... 25 6.3
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 25 6.3
11_01_0790 + 6617659-6619593,6619696-6620106 25 8.3
10_02_0144 + 5815403-5815520,5815551-5816314 25 8.3
07_01_0013 - 99952-100413,100534-100704 25 8.3
06_03_1308 - 29221583-29221630,29221709-29221786,29221908-292219... 25 8.3
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 25 8.3
04_03_0183 + 12352147-12352179,12352390-12353349,12353815-123539... 25 8.3
02_03_0164 - 15862166-15862366,15862443-15862508,15862754-158630... 25 8.3
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 119 bits (287), Expect = 3e-28
Identities = 53/89 (59%), Positives = 68/89 (76%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
++GV +K ++ D GKAL+K VM++WLPA ALL+M+ HLPSP AQKYR+E LYEGP
Sbjct: 300 KLGVVMKADEKDLMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQKYRVENLYEGPL 359
Query: 186 DDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DD A I+ C+PE PLM+YVSKM+P SD
Sbjct: 360 DDVYATAIRNCDPEGPLMLYVSKMIPASD 388
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 117 bits (282), Expect = 1e-27
Identities = 50/90 (55%), Positives = 69/90 (76%)
Frame = +3
Query: 3 TRIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGP 182
T++ +TLK E+ + GK L+K VM++WLPA +ALL+MI HLPSP AQ+YR++ LY+GP
Sbjct: 301 TKLKITLKAEEKELTGKKLMKRVMQAWLPASDALLEMIVFHLPSPAKAQQYRVDTLYDGP 360
Query: 183 HDDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DD A I+ C+P+ PLM+YVSKM+P SD
Sbjct: 361 LDDPYATAIRNCDPKGPLMVYVSKMIPASD 390
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 116 bits (280), Expect = 2e-27
Identities = 51/89 (57%), Positives = 68/89 (76%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
++GV +K ++ + GKAL+K VM++WLPA ALL+M+ HLPSP AQ+YR+E LYEGP
Sbjct: 300 KLGVVMKADEKELMGKALMKRVMQTWLPASNALLEMMIYHLPSPSKAQRYRVENLYEGPL 359
Query: 186 DDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DD A I+ C+PE PLM+YVSKM+P SD
Sbjct: 360 DDVYATAIRNCDPEGPLMLYVSKMIPASD 388
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 113 bits (272), Expect = 2e-26
Identities = 53/89 (59%), Positives = 67/89 (75%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
++GVT+K D GKAL+K VM++WLPA ALL+M+ HLPSP AQ+YR+E LYEGP
Sbjct: 300 KLGVTMK----DLTGKALMKRVMQTWLPASNALLEMMIYHLPSPAKAQRYRVENLYEGPL 355
Query: 186 DDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DD A I+ C+PE PLM+YVSKM+P SD
Sbjct: 356 DDIYASAIRNCDPEGPLMLYVSKMIPASD 384
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 60.5 bits (140), Expect = 2e-10
Identities = 30/90 (33%), Positives = 47/90 (52%)
Frame = +3
Query: 3 TRIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGP 182
+ +GVTL + + + LL++ RS M+ H+PS A ++E +Y GP
Sbjct: 421 SELGVTLSNAAYKLNVRPLLRLACRSIFGTSTGFTDMLVKHIPSVKDAAPRKIEHIYTGP 480
Query: 183 HDDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
D +K C+P APLM+ V+K+ P SD
Sbjct: 481 QDSTIVDAMKKCDPHAPLMVNVTKLYPKSD 510
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 57.2 bits (132), Expect = 2e-09
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
+I VT+ + G L+K V+++WLPA AL +M+ H+PSP AQ++ + +
Sbjct: 480 KIHVTVSSPAKELVGIELVKYVIQAWLPACSALSEMMMYHIPSPEKAQRHCVGN-FGVDL 538
Query: 186 DDEAALGIKTCEPEAPLMMYVSKM 257
D+ ++ C+ E PL++YVSKM
Sbjct: 539 DNIYHTSVRNCDAEGPLVLYVSKM 562
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 41.9 bits (94), Expect = 7e-05
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 17/95 (17%)
Frame = +3
Query: 24 KHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLY---EGPHDDE 194
+ E +KD K +L+ VM WLP +A++ M+ P PV AQ R+ L E +D
Sbjct: 315 QRELQNKDPKVVLQAVMSRWLPLADAVMTMVVECTPDPVAAQGVRVARLMPKREVAPEDA 374
Query: 195 A--------ALGIKTC------EPEAPLMMYVSKM 257
A A +++C +AP+++YVSKM
Sbjct: 375 AGSPDIVVDAERVRSCVEACDARADAPVVVYVSKM 409
>12_01_0373 + 2897874-2898911
Length = 345
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 108 EVGLHRPAATNASQPSVKPCRPCP 37
+ G RPAATN+ +V+P RP P
Sbjct: 134 DAGPGRPAATNSILATVRPRRPPP 157
>09_02_0051 -
3606453-3606473,3606562-3606957,3608250-3608419,
3609654-3610707
Length = 546
Score = 27.1 bits (57), Expect = 2.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 207 YRGQPHHHEGLHTTSPYGIS 148
Y + HHH + +++PYGIS
Sbjct: 505 YGAEAHHHPTMISSAPYGIS 524
>11_06_0678 +
26166476-26166660,26166753-26166807,26166925-26167040,
26167535-26167604,26167795-26167844,26168160-26168439,
26170057-26170333,26170491-26170591
Length = 377
Score = 26.6 bits (56), Expect = 2.7
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 54 ALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAALGIKTCEPEAP 233
A+L V+R L GEA L ++ ++PS K ++ + D+A L IK P
Sbjct: 277 AVLGGVLRVKLKNGEASLSDVSFNMPSSKTGSK-KLILAARVLSSDKAGLQIKEAVMNQP 335
Query: 234 LMMYVSK 254
+ + V++
Sbjct: 336 VEVQVNR 342
>01_01_1055 +
8342761-8342822,8343374-8343791,8343867-8344096,
8344136-8344324,8344458-8344555,8344588-8344742
Length = 383
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 177 LHTTSPYGISGRPQVMEGG*QSSEVGLHRPAATNASQPSVKPCRPC 40
LH + GR V GG + HR A + SV+PC PC
Sbjct: 180 LHRRDAPAVLGREGVAAGG-GGGRIEGHREPAEDGGVASVRPC-PC 223
>03_05_0614 -
26129627-26129784,26130110-26130282,26131236-26131284,
26132649-26132697,26132987-26133082
Length = 174
Score = 26.2 bits (55), Expect = 3.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 130 HHLWSPRNTVWRCCMKALMM 189
HH SP+ WRC M L++
Sbjct: 124 HHAASPKGPCWRCHMTCLIV 143
>10_05_0014 + 8018021-8019049
Length = 342
Score = 25.8 bits (54), Expect = 4.7
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVM-----RSWLPAGE 98
R G LK DS ++GK LL +++ + WL AGE
Sbjct: 272 RAGSLLKPTDSREEGKDLLGLLLAMVQEQEWLAAGE 307
>09_02_0052 -
3616013-3616033,3616116-3616514,3617925-3618094,
3619691-3620732
Length = 543
Score = 25.8 bits (54), Expect = 4.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 207 YRGQPHHHEGLHTTSPYGIS 148
Y + HHH + +++PYG+S
Sbjct: 502 YGAEAHHHPTMISSAPYGMS 521
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 25.8 bits (54), Expect = 4.7
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = -3
Query: 226 SGSQVLIPRAASSS*GPSYNISIRYFWATTGDGRWIAII*SRASPAGSHERITTF--SKA 53
SGS V+ + + Y I+ W T G ++ ++ A + IT F K
Sbjct: 158 SGSDVVSMKCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSKGITAFIIEKG 217
Query: 52 LPSLSESSCL 23
+P S + L
Sbjct: 218 MPGFSTAQKL 227
>03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,
5368467-5368577,5368997-5369068,5369719-5369737,
5369838-5371142,5371317-5371397,5372441-5372604,
5373363-5373466,5373537-5373628,5374079-5374216,
5374370-5374426,5374820-5375046
Length = 1713
Score = 25.8 bits (54), Expect = 4.7
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 63 KVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAALGIKTCE 221
K V + +P L I +HL SP + RM + Y H D A+ + E
Sbjct: 1456 KRVFKRTVPGLIGALFNIVLHLESPFIFYTERMPVHYPYLHPDAGAIVLMCIE 1508
>12_02_0645 +
21475126-21475293,21475386-21475538,21478101-21478249,
21478449-21478526,21478604-21478697,21478920-21478994,
21479341-21479637,21479722-21479789,21479876-21479930,
21480137-21480275,21480439-21480623,21480748-21481119
Length = 610
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 77 FVAAGR*SPTSDDCYPPSITCGRPEI 154
FVA G TSDD PPS+ P +
Sbjct: 395 FVANGVVDETSDDVTPPSVLMEHPPL 420
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 24 KHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRM 161
K + D+ + +++V+ P G+ L ++ LP+ V+ Q Y M
Sbjct: 286 KSDALDRHDLSSIRMVISGAAPMGKELQDIVHAKLPNAVLGQGYGM 331
>08_02_0099 +
12343518-12343678,12344193-12344393,12344669-12344846,
12347201-12347463,12347596-12347874,12348045-12349182,
12349303-12349473
Length = 796
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 99 LHRPAATNASQPSVKPCRPCP 37
LHR A N SQ ++ PCP
Sbjct: 27 LHRSATNNTSQVAMVGSNPCP 47
>06_03_1313 -
29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1
Query: 258 PFCSRTS*EVLRAHKS*YRGQPHHHEGLHTTSPYGISGRPQVMEGG*QSSEVGLHR 91
PF S+ + ++ Y G H + L+ +SPYG+S +++G +GLHR
Sbjct: 244 PFASKINCCPVQRDLGGYAGSGVHSDILNNSSPYGVS-EAHMIDG------MGLHR 292
>02_01_0385 +
2783387-2783695,2784149-2785082,2785206-2785309,
2785402-2785486,2785517-2787578,2787732-2787753,
2788157-2788327,2791473-2791517,2792558-2793874,
2793962-2794012,2794090-2794188,2794352-2794504,
2794554-2794571
Length = 1789
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -2
Query: 245 VHHERCFGLTSLDTEGSLIIMRAFIQHLHTVFL 147
VHH G ++ ++ +R+++ HL T+FL
Sbjct: 880 VHHLAIKGYCGIELPKWMLDIRSYLPHLTTIFL 912
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = -1
Query: 207 YRGQPHHHEGLHTTSPYGISGRPQVMEGG*QSSEVGLHRPAATNASQPSVKPCRPCP 37
+ G+P S SGR Q G +++ G R A A+ P V +P P
Sbjct: 15 FMGRPLARSAQPPPSGPRFSGRAQRRRGSNEATACGKGRSRAGRAASPDVVATKPPP 71
>11_01_0790 + 6617659-6619593,6619696-6620106
Length = 781
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +3
Query: 30 EDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPS 134
++ ++ GK L + + SW GE L+++ +H+P+
Sbjct: 642 DEKEEHGKNLRYLAL-SWCQLGEDPLRVLGLHVPN 675
>10_02_0144 + 5815403-5815520,5815551-5816314
Length = 293
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 84 LPAGEALLQMIAIHLPSPVVAQ 149
+PA EA L++ A LP PVV +
Sbjct: 221 MPAAEARLRVAAGQLPDPVVKE 242
>07_01_0013 - 99952-100413,100534-100704
Length = 210
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 72 SQPSVKPCRPCPSLRA 25
+Q SV PCRPC + A
Sbjct: 112 AQSSVPPCRPCSATHA 127
>06_03_1308 -
29221583-29221630,29221709-29221786,29221908-29221952,
29222075-29222187,29222283-29222406
Length = 135
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 162 PYGISGRPQVMEGG*QSSEVGLHRPAATNASQPSVKPCRPC 40
P S PQ + GG +V + RP + A Q + K C
Sbjct: 30 PETFSNIPQTLSGGDGKQQVRIKRPKSAKALQCTSKCVATC 70
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -3
Query: 124 WIAII*SRASPAGSHERITTFSKALPSLSESSCLSVTPIL 5
W A+I + SHE + F + + S S +C+++ +L
Sbjct: 484 WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVL 523
>04_03_0183 +
12352147-12352179,12352390-12353349,12353815-12353998,
12354087-12354799
Length = 629
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 144 RPQVMEGG*QSSEVGLHRPAATNASQPS-VKPCRP 43
R Q G Q S +GL +P+ SQPS + P +P
Sbjct: 37 RSQEATGPSQPSCIGLSQPSCIGPSQPSCIGPSQP 71
>02_03_0164 -
15862166-15862366,15862443-15862508,15862754-15863029,
15864869-15864989,15865091-15865368
Length = 313
Score = 25.0 bits (52), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +3
Query: 45 DGKALLKVVMRSWLPAGEALLQMIAIHLPSP------VVAQKYRMEMLYEGPHDDEAALG 206
DG + ++ S LPA +AL +++ P P V+A+ R+ + D A L
Sbjct: 31 DGTFVHHLLSHSLLPADDALQSLLSASRPPPLFTSKCVLAELRRLGKSHADAFDAAALLA 90
Query: 207 IKTCE 221
CE
Sbjct: 91 TAKCE 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,011,865
Number of Sequences: 37544
Number of extensions: 195752
Number of successful extensions: 468
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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