Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_D12
(273 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 147 5e-36
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 147 5e-36
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 147 5e-36
BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein. 147 5e-36
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 147 5e-36
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 120 6e-28
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 55 4e-08
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 55 4e-08
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 55 4e-08
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 55 4e-08
AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens ... 36 0.030
AK090647-1|BAC03496.1| 353|Homo sapiens protein. 29 2.6
X57197-1|CAA40483.1| 494|Homo sapiens ATFa protein. 28 6.1
X52943-1|CAA37118.1| 483|Homo sapiens protein ( Human mRNA for ... 28 6.1
BC132812-1|AAI32813.1| 1198|Homo sapiens FNDC3A protein protein. 27 8.1
BC070072-1|AAH70072.1| 853|Homo sapiens FNDC3A protein protein. 27 8.1
BC060816-1|AAH60816.1| 853|Homo sapiens FNDC3A protein protein. 27 8.1
AL355338-2|CAH70367.1| 532|Homo sapiens Zic family member 2 (od... 27 8.1
AL137000-1|CAI39726.2| 1142|Homo sapiens fibronectin type III do... 27 8.1
AJ749707-1|CAG44603.1| 1134|Homo sapiens human gene expressed in... 27 8.1
AJ749706-1|CAG44602.1| 1198|Homo sapiens human gene expressed in... 27 8.1
AF193855-1|AAG28409.1| 532|Homo sapiens zinc finger protein of ... 27 8.1
AF104902-1|AAC96325.1| 533|Homo sapiens ZIC2 protein protein. 27 8.1
AB023187-1|BAA76814.2| 1151|Homo sapiens KIAA0970 protein protein. 27 8.1
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 147 bits (357), Expect = 5e-36
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
++ + L ED DK+GK LLK VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEGP
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPP 377
Query: 186 DDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DDEAA+GIK+C+P+ PLMMY+SKMVPTSD
Sbjct: 378 DDEAAMGIKSCDPKGPLMMYISKMVPTSD 406
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 147 bits (357), Expect = 5e-36
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
++ + L ED DK+GK LLK VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEGP
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPP 377
Query: 186 DDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DDEAA+GIK+C+P+ PLMMY+SKMVPTSD
Sbjct: 378 DDEAAMGIKSCDPKGPLMMYISKMVPTSD 406
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 147 bits (357), Expect = 5e-36
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
++ + L ED DK+GK LLK VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEGP
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPP 377
Query: 186 DDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DDEAA+GIK+C+P+ PLMMY+SKMVPTSD
Sbjct: 378 DDEAAMGIKSCDPKGPLMMYISKMVPTSD 406
>BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein.
Length = 583
Score = 147 bits (357), Expect = 5e-36
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
++ + L ED DK+GK LLK VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEGP
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPP 377
Query: 186 DDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DDEAA+GIK+C+P+ PLMMY+SKMVPTSD
Sbjct: 378 DDEAAMGIKSCDPKGPLMMYISKMVPTSD 406
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 147 bits (357), Expect = 5e-36
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = +3
Query: 6 RIGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPH 185
++ + L ED DK+GK LLK VMR WLPAG+ALLQMI IHLPSPV AQKYR E+LYEGP
Sbjct: 318 KLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPP 377
Query: 186 DDEAALGIKTCEPEAPLMMYVSKMVPTSD 272
DDEAA+GIK+C+P+ PLMMY+SKMVPTSD
Sbjct: 378 DDEAAMGIKSCDPKGPLMMYISKMVPTSD 406
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 120 bits (290), Expect = 6e-28
Identities = 52/64 (81%), Positives = 59/64 (92%)
Frame = +3
Query: 81 WLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAALGIKTCEPEAPLMMYVSKMV 260
WLPAG+ALLQMI IHLPSPV AQKYR E+LYEGP DDEAA+GIK+C+P+ PLMMY+SKMV
Sbjct: 2 WLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMV 61
Query: 261 PTSD 272
PTSD
Sbjct: 62 PTSD 65
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +3
Query: 9 IGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHD 188
+G+ L E+ + + LL++V + + + M H+PSP V K ++E Y G D
Sbjct: 404 LGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVD 463
Query: 189 DEAALGIKTCEPEAPLMMYVSKMVPTSD 272
+ + C+P+ PLM + +KM T D
Sbjct: 464 SDLGEAMSDCDPDGPLMCHTTKMYSTDD 491
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +3
Query: 9 IGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHD 188
+G+ L E+ + + LL++V + + + M H+PSP V K ++E Y G D
Sbjct: 399 LGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVD 458
Query: 189 DEAALGIKTCEPEAPLMMYVSKMVPTSD 272
+ + C+P+ PLM + +KM T D
Sbjct: 459 SDLGEAMSDCDPDGPLMCHTTKMYSTDD 486
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +3
Query: 9 IGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHD 188
+G+ L E+ + + LL++V + + + M H+PSP V K ++E Y G D
Sbjct: 399 LGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVD 458
Query: 189 DEAALGIKTCEPEAPLMMYVSKMVPTSD 272
+ + C+P+ PLM + +KM T D
Sbjct: 459 SDLGEAMSDCDPDGPLMCHTTKMYSTDD 486
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +3
Query: 9 IGVTLKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHD 188
+G+ L E+ + + LL++V + + + M H+PSP V K ++E Y G D
Sbjct: 277 LGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVD 336
Query: 189 DEAALGIKTCEPEAPLMMYVSKMVPTSD 272
+ + C+P+ PLM + +KM T D
Sbjct: 337 SDLGEAMSDCDPDGPLMCHTTKMYSTDD 364
>AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens
cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
ELONGATION FACTOR 2. ).
Length = 857
Score = 35.5 bits (78), Expect = 0.030
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Frame = +3
Query: 3 TRIGVTL-KHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEML--- 170
T +G+ + E D K + + WLP A+L M+ LPSP+ R+E L
Sbjct: 58 TSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVCQKLPSPLDITAERVERLMCT 117
Query: 171 ----YEG--PHDDEAALGIKTC--EPEAPLMMYVSKM 257
++ P C E AP++++VSKM
Sbjct: 118 GSQTFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKM 154
>AK090647-1|BAC03496.1| 353|Homo sapiens protein.
Length = 353
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 105 VGLHRPAATNASQPSVKPCRPCPS 34
V H A T Q V+PCRP PS
Sbjct: 292 VSNHSSAGTGLGQDGVRPCRPWPS 315
>X57197-1|CAA40483.1| 494|Homo sapiens ATFa protein.
Length = 494
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 117 QSSEVGLHRPAATNASQPSVKPCRPCPS 34
+ S++ + P A + +QP V P +P PS
Sbjct: 302 EQSQILIQHPDAPSPAQPQVSPAQPTPS 329
>X52943-1|CAA37118.1| 483|Homo sapiens protein ( Human mRNA for
ATF-a transcription factor. ).
Length = 483
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 117 QSSEVGLHRPAATNASQPSVKPCRPCPS 34
+ S++ + P A + +QP V P +P PS
Sbjct: 291 EQSQILIQHPDAPSPAQPQVSPAQPTPS 318
>BC132812-1|AAI32813.1| 1198|Homo sapiens FNDC3A protein protein.
Length = 1198
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 26 ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPSITC 139
A ++G G F+E CD A G D C PP +TC
Sbjct: 738 ANKMGFGP--FSEKCDITTAPG----PPDQCKPPQVTC 769
>BC070072-1|AAH70072.1| 853|Homo sapiens FNDC3A protein protein.
Length = 853
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 26 ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPSITC 139
A ++G G F+E CD A G D C PP +TC
Sbjct: 393 ANKMGFGP--FSEKCDITTAPG----PPDQCKPPQVTC 424
>BC060816-1|AAH60816.1| 853|Homo sapiens FNDC3A protein protein.
Length = 853
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 26 ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPSITC 139
A ++G G F+E CD A G D C PP +TC
Sbjct: 393 ANKMGFGP--FSEKCDITTAPG----PPDQCKPPQVTC 424
>AL355338-2|CAH70367.1| 532|Homo sapiens Zic family member 2
(odd-paired homolog, Drosophila) protein.
Length = 532
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -1
Query: 186 HEGLHTTSPYGISGRPQVMEGG*QSSEVGLHRPAATNASQPSVKP 52
H +H +SP G P G S+ GL P+A S ++ P
Sbjct: 411 HMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSP 455
>AL137000-1|CAI39726.2| 1142|Homo sapiens fibronectin type III
domain containing 3A protein.
Length = 1142
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 26 ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPSITC 139
A ++G G F+E CD A G D C PP +TC
Sbjct: 682 ANKMGFGP--FSEKCDITTAPG----PPDQCKPPQVTC 713
>AJ749707-1|CAG44603.1| 1134|Homo sapiens human gene expressed in
odontoblast protein protein.
Length = 1134
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 26 ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPSITC 139
A ++G G F+E CD A G D C PP +TC
Sbjct: 674 ANKMGFGP--FSEKCDITTAPG----PPDQCKPPQVTC 705
>AJ749706-1|CAG44602.1| 1198|Homo sapiens human gene expressed in
odontoblast protein protein.
Length = 1198
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 26 ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPSITC 139
A ++G G F+E CD A G D C PP +TC
Sbjct: 738 ANKMGFGP--FSEKCDITTAPG----PPDQCKPPQVTC 769
>AF193855-1|AAG28409.1| 532|Homo sapiens zinc finger protein of
cerebellum ZIC2 protein.
Length = 532
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -1
Query: 186 HEGLHTTSPYGISGRPQVMEGG*QSSEVGLHRPAATNASQPSVKP 52
H +H +SP G P G S+ GL P+A S ++ P
Sbjct: 411 HMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSP 455
>AF104902-1|AAC96325.1| 533|Homo sapiens ZIC2 protein protein.
Length = 533
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -1
Query: 186 HEGLHTTSPYGISGRPQVMEGG*QSSEVGLHRPAATNASQPSVKP 52
H +H +SP G P G S+ GL P+A S ++ P
Sbjct: 412 HMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSP 456
>AB023187-1|BAA76814.2| 1151|Homo sapiens KIAA0970 protein protein.
Length = 1151
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 26 ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPSITC 139
A ++G G F+E CD A G D C PP +TC
Sbjct: 691 ANKMGFGP--FSEKCDITTAPG----PPDQCKPPQVTC 722
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,736,610
Number of Sequences: 237096
Number of extensions: 1031168
Number of successful extensions: 2219
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2219
length of database: 76,859,062
effective HSP length: 68
effective length of database: 60,736,534
effective search space used: 1336203748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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