Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D12
         (273 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   0.68 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   1.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   2.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   4.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   6.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   6.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   6.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   8.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   8.4  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 0.68
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = -1

Query: 207 YRGQ-PHHHEGLHTTSP 160
           +RG  PHH  G HT  P
Sbjct: 329 HRGSSPHHQHGNHTMGP 345



 Score = 20.2 bits (40), Expect = 4.8
 Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = -1

Query: 201 GQPHHHEGLHTTSPYGISGR-PQVMEGG*QSSEVGLHRPAATNASQPSVKPCRPCP 37
           G PHHH    T S   +  R P  +     S    ++   A  A+     PC P P
Sbjct: 348 GPPHHHHHHQTQSLQHLHYRQPPTLSESYSSYVNSMYASGAQFAT-----PCTPSP 398


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 192 HHHEGLHTTSPY 157
           HHH+ L+  SPY
Sbjct: 77  HHHQVLYQQSPY 88


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +3

Query: 66  VVMRSWLPAGEALLQMIAIHLPSPVV 143
           +V  SW+P+    +Q      P P++
Sbjct: 471 LVWNSWMPSIRGAIQQWTCRQPEPLI 496


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 38  GQGRQGFTEGCDAFVA 85
           G  +  F+ GC  FVA
Sbjct: 409 GSNQIAFSRGCSGFVA 424


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 113 DCYPPSITCGRP 148
           +C   S+TC RP
Sbjct: 260 ECVTNSVTCDRP 271


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 26  ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPS 130
           A  +G+G+ G    CD +   G+  P +     PS
Sbjct: 597 AEEIGRGQYGIVFACDGW--GGKAGPCAIKSVVPS 629


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 26  ARRLGQGRQGFTEGCDAFVAAGR*SPTSDDCYPPS 130
           A  +G+G+ G    CD +   G+  P +     PS
Sbjct: 635 AEEIGRGQYGIVFACDGW--GGKAGPCAIKSVVPS 667


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 107 SDDCYPPSITCGRPEIPYG 163
           SDD     I    PE+PYG
Sbjct: 863 SDDTSINMIVQEVPEVPYG 881


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 9   IGVTLKHEDSDKDGK 53
           +G  + ++D+D DGK
Sbjct: 276 LGHMISYDDTDGDGK 290


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,388
Number of Sequences: 438
Number of extensions: 1601
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)