Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_D11
(324 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 87 1e-17
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 87 1e-17
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 87 1e-17
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 87 1e-17
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 87 1e-17
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 87 1e-17
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 87 1e-17
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 87 1e-17
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 87 1e-17
BC039322-1|AAH39322.1| 401|Homo sapiens RBM17 protein protein. 52 3e-07
BC009064-1|AAH09064.1| 369|Homo sapiens RBM17 protein protein. 52 3e-07
BC007871-1|AAH07871.1| 401|Homo sapiens RNA binding motif prote... 52 3e-07
AL157395-8|CAH73602.1| 401|Homo sapiens RNA binding motif prote... 52 3e-07
AF542550-1|AAQ09533.1| 401|Homo sapiens unknown protein. 52 3e-07
BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein. 38 0.007
AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UH... 38 0.007
AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein. 38 0.007
Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor... 38 0.009
U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein. 38 0.009
BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor... 38 0.009
BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific fact... 38 0.009
AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor... 38 0.009
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 33 0.15
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 33 0.15
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 33 0.20
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 32 0.35
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 32 0.35
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 32 0.35
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 32 0.35
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 32 0.46
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 32 0.46
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 32 0.46
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 32 0.46
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 32 0.46
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 32 0.46
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 31 0.60
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 31 0.60
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 31 0.60
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 28 7.4
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 28 7.4
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 28 7.4
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 28 7.4
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 28 7.4
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 28 7.4
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 28 7.4
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 464 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 522
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 523 KVVAEVYDQERFDNSDLSA 541
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 482 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 540
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 541 KVVAEVYDQERFDNSDLSA 559
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 439 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 497
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 498 KVVAEVYDQERFDNSDLSA 516
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 439 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 497
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 498 KVVAEVYDQERFDNSDLSA 516
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 422 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 480
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 481 KVVAEVYDQERFDNSDLSA 499
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 465 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 523
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 524 KVVAEVYDQERFDNSDLSA 542
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 465 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 523
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 524 KVVAEVYDQERFDNSDLSA 542
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 479 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 537
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 538 KVVAEVYDQERFDNSDLSA 556
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E+ EECGK+G V+R++IY E+Q E+ED A VKIFV+F+ E L+GR+F GR
Sbjct: 482 EVTEECGKFGAVNRVIIYQEKQGEEED-AEIIVKIFVEFSIASETHKAIQALNGRWFAGR 540
Query: 195 TVRASLYDQELFDHGDLSA 251
V A +YDQE FD+ DLSA
Sbjct: 541 KVVAEVYDQERFDNSDLSA 559
>BC039322-1|AAH39322.1| 401|Homo sapiens RBM17 protein protein.
Length = 401
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E +EEC K+G+V + +I+ D++ V+IF++F + L+GRYFGGR
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYFGGR 380
Query: 195 TVRASLYDQELFDHGDLS 248
V+A Y+ + F DL+
Sbjct: 381 VVKACFYNLDKFRVLDLA 398
>BC009064-1|AAH09064.1| 369|Homo sapiens RBM17 protein protein.
Length = 369
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E +EEC K+G+V + +I+ D++ V+IF++F + L+GRYFGGR
Sbjct: 293 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYFGGR 348
Query: 195 TVRASLYDQELFDHGDLS 248
V+A Y+ + F DL+
Sbjct: 349 VVKACFYNLDKFRVLDLA 366
>BC007871-1|AAH07871.1| 401|Homo sapiens RNA binding motif protein
17 protein.
Length = 401
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E +EEC K+G+V + +I+ D++ V+IF++F + L+GRYFGGR
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYFGGR 380
Query: 195 TVRASLYDQELFDHGDLS 248
V+A Y+ + F DL+
Sbjct: 381 VVKACFYNLDKFRVLDLA 398
>AL157395-8|CAH73602.1| 401|Homo sapiens RNA binding motif protein
17 protein.
Length = 401
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E +EEC K+G+V + +I+ D++ V+IF++F + L+GRYFGGR
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYFGGR 380
Query: 195 TVRASLYDQELFDHGDLS 248
V+A Y+ + F DL+
Sbjct: 381 VVKACFYNLDKFRVLDLA 398
>AF542550-1|AAQ09533.1| 401|Homo sapiens unknown protein.
Length = 401
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
E +EEC K+G+V + +I+ D++ V+IF++F + L+GRYFGGR
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYFGGR 380
Query: 195 TVRASLYDQELFDHGDLS 248
V+A Y+ + F DL+
Sbjct: 381 VVKACFYNLDKFRVLDLA 398
>BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein.
Length = 314
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
+++EEC K+G V LL+ E+P R ++FV++ + + L GR F G+
Sbjct: 241 DVKEECQKYGPVVSLLV------PKENPGRG--QVFVEYANAGDSKAAQKLLTGRMFDGK 292
Query: 195 TVRASLYDQELFDHGDL 245
V A+ Y + G L
Sbjct: 293 FVVATFYPLSAYKRGYL 309
>AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UHM)
kinase 1 protein.
Length = 419
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
+++EEC K+G V LL+ E+P R ++FV++ + + L GR F G+
Sbjct: 346 DVKEECQKYGPVVSLLV------PKENPGRG--QVFVEYANAGDSKAAQKLLTGRMFDGK 397
Query: 195 TVRASLYDQELFDHGDL 245
V A+ Y + G L
Sbjct: 398 FVVATFYPLSAYKRGYL 414
>AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein.
Length = 419
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
+++EEC K+G V LL+ E+P R ++FV++ + + L GR F G+
Sbjct: 346 DVKEECQKYGPVVSLLV------PKENPGRG--QVFVEYANAGDSKAAQKLLTGRMFDGK 397
Query: 195 TVRASLYDQELFDHGDL 245
V A+ Y + G L
Sbjct: 398 FVVATFYPLSAYKRGYL 414
>Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 755
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
+++ EC K+G++ +LL++ D P V F P+E L GR+FGGR
Sbjct: 290 DLRVECSKFGQIRKLLLF------DRHPDGV---ASVSFRDPEEADYCIQTLDGRWFGGR 340
Query: 195 TVRASLYD 218
+ A +D
Sbjct: 341 QITAQAWD 348
>U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein.
Length = 754
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
+++ EC K+G++ +LL++ D P V F P+E L GR+FGGR
Sbjct: 290 DLRVECSKFGQIRKLLLF------DRHPDGV---ASVSFRDPEEADYCIQTLDGRWFGGR 340
Query: 195 TVRASLYD 218
+ A +D
Sbjct: 341 QITAQAWD 348
>BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor 1
protein.
Length = 755
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
+++ EC K+G++ +LL++ D P V F P+E L GR+FGGR
Sbjct: 290 DLRVECSKFGQIRKLLLF------DRHPDGV---ASVSFRDPEEADYCIQTLDGRWFGGR 340
Query: 195 TVRASLYD 218
+ A +D
Sbjct: 341 QITAQAWD 348
>BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific factor
1 protein.
Length = 755
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
+++ EC K+G++ +LL++ D P V F P+E L GR+FGGR
Sbjct: 290 DLRVECSKFGQIRKLLLF------DRHPDGV---ASVSFRDPEEADYCIQTLDGRWFGGR 340
Query: 195 TVRASLYD 218
+ A +D
Sbjct: 341 QITAQAWD 348
>AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor 1
variant protein.
Length = 758
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
+++ EC K+G++ +LL++ D P V F P+E L GR+FGGR
Sbjct: 293 DLRVECSKFGQIRKLLLF------DRHPDGV---ASVSFRDPEEADYCIQTLDGRWFGGR 343
Query: 195 TVRASLYD 218
+ A +D
Sbjct: 344 QITAQAWD 351
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/72 (22%), Positives = 36/72 (50%)
Frame = +3
Query: 18 IQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRT 197
++ E GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKAAARDMNGKSLDGKA 78
Query: 198 VRASLYDQELFD 233
++ + + F+
Sbjct: 79 IKVAQATKPAFE 90
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/72 (22%), Positives = 36/72 (50%)
Frame = +3
Query: 18 IQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRT 197
++ E GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKAAARDMNGKSLDGKA 78
Query: 198 VRASLYDQELFD 233
++ + + F+
Sbjct: 79 IKVAQATKPAFE 90
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/72 (22%), Positives = 36/72 (50%)
Frame = +3
Query: 18 IQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRT 197
++ E GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+
Sbjct: 18 LEAEFGKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKAAVRDMNGKSLDGKA 72
Query: 198 VRASLYDQELFD 233
++ + + F+
Sbjct: 73 IKVAQATKPAFE 84
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLIKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFERG 92
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLIKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFERG 92
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLIKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFERG 92
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLIKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFERG 92
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFESG 92
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFESG 92
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFESG 92
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFESG 92
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFESG 92
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 33 GKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGRTVRASL 212
GK+GR+ +L+ +R+T ++ FV F SP + ++G+ G+ ++
Sbjct: 29 GKYGRIVEVLLMKDRETN-----KSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQ 83
Query: 213 YDQELFDHG 239
+ F+ G
Sbjct: 84 ATKPSFESG 92
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++++EC K+G V + I + D KIFV+FTS + L GR F R
Sbjct: 401 DVRDECSKYGLVKSIEI---PRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR 457
Query: 195 TVRASLYDQELFDHGD 242
V D + + D
Sbjct: 458 VVVTKYCDPDSYHRRD 473
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++++EC K+G V + I + D KIFV+FTS + L GR F R
Sbjct: 397 DVRDECSKYGLVKSIEI---PRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR 453
Query: 195 TVRASLYDQELFDHGD 242
V D + + D
Sbjct: 454 VVVTKYCDPDSYHRRD 469
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++++EC K+G V + I + D KIFV+FTS + L GR F R
Sbjct: 397 DVRDECSKYGLVKSIEI---PRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR 453
Query: 195 TVRASLYDQELFDHGD 242
V D + + D
Sbjct: 454 VVVTKYCDPDSYHRRD 469
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++ EEC K G V + + D++ A+ +V +V+ S LHGR+F G+
Sbjct: 449 DVIEECNKHGGVIHIYV-------DKNSAQGNV--YVKCPSIAAAIAAVNALHGRWFAGK 499
Query: 195 TVRAS 209
+ A+
Sbjct: 500 MITAA 504
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++ EEC K G V + + D++ A+ +V +V+ S LHGR+F G+
Sbjct: 443 DVIEECNKHGGVIHIYV-------DKNSAQGNV--YVKCPSIAAAIAAVNALHGRWFAGK 493
Query: 195 TVRAS 209
+ A+
Sbjct: 494 MITAA 498
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++ EEC K G V + + D++ A+ +V +V+ S LHGR+F G+
Sbjct: 292 DVIEECNKHGGVIHIYV-------DKNSAQGNV--YVKCPSIAAAIAAVNALHGRWFAGK 342
Query: 195 TVRAS 209
+ A+
Sbjct: 343 MITAA 347
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++ EEC K G V + + D++ A+ +V +V+ S LHGR+F G+
Sbjct: 449 DVIEECNKHGGVIHIYV-------DKNSAQGNV--YVKCPSIAAAIAAVNALHGRWFAGK 499
Query: 195 TVRAS 209
+ A+
Sbjct: 500 MITAA 504
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++ EEC K G V + + D++ A+ +V +V+ S LHGR+F G+
Sbjct: 427 DVIEECNKHGGVIHIYV-------DKNSAQGNV--YVKCPSIAAAIAAVNALHGRWFAGK 477
Query: 195 TVRAS 209
+ A+
Sbjct: 478 MITAA 482
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++ EEC K G V + + D++ A+ +V +V+ S LHGR+F G+
Sbjct: 443 DVIEECNKHGGVIHIYV-------DKNSAQGNV--YVKCPSIAAAIAAVNALHGRWFAGK 493
Query: 195 TVRAS 209
+ A+
Sbjct: 494 MITAA 498
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 15 EIQEECGKWGRVDRLLIYNERQTEDEDPARAHVKIFVQFTSPDEXXXXXXXLHGRYFGGR 194
++ EEC K G V + + D++ A+ +V +V+ S LHGR+F G+
Sbjct: 449 DVIEECNKHGGVIHIYV-------DKNSAQGNV--YVKCPSIAAAIAAVNALHGRWFAGK 499
Query: 195 TVRAS 209
+ A+
Sbjct: 500 MITAA 504
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,328,805
Number of Sequences: 237096
Number of extensions: 372793
Number of successful extensions: 863
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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