Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_D09
(281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 36 0.004
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 36 0.004
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 36 0.006
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 36 0.006
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 33 0.024
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 31 0.096
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 31 0.096
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 30 0.22
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 30 0.22
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 29 0.39
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 0.39
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 0.39
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 29 0.68
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 0.90
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 0.90
AF125460-1|AAD12847.3| 456|Caenorhabditis elegans Hypothetical ... 28 0.90
AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2 ... 28 0.90
AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2 ... 28 0.90
AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 li... 28 0.90
AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 li... 28 0.90
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 28 0.90
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 28 0.90
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 1.2
Z68882-10|CAA93111.1| 397|Caenorhabditis elegans Hypothetical p... 27 1.6
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 1.6
AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical ... 27 1.6
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 27 2.1
AF125965-3|AAD14757.1| 266|Caenorhabditis elegans Hypothetical ... 27 2.1
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 27 2.7
Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical pr... 26 3.6
Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical pr... 26 3.6
Z68752-11|CAM82780.1| 324|Caenorhabditis elegans Hypothetical p... 26 3.6
Z68752-10|CAA92986.1| 354|Caenorhabditis elegans Hypothetical p... 26 3.6
AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical... 26 3.6
AL023840-2|CAM82781.1| 324|Caenorhabditis elegans Hypothetical ... 26 3.6
AL023840-1|CAA19510.1| 354|Caenorhabditis elegans Hypothetical ... 26 3.6
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 26 3.6
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 26 3.6
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 26 3.6
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 26 3.6
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 26 3.6
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 26 3.6
Z70036-2|CAE17914.1| 155|Caenorhabditis elegans Hypothetical pr... 26 4.8
U40028-5|AAA81116.1| 137|Caenorhabditis elegans Hmg protein 11 ... 26 4.8
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 26 4.8
AF056578-1|AAC78600.1| 137|Caenorhabditis elegans high mobility... 26 4.8
AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical... 26 4.8
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 26 4.8
Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical pr... 25 6.3
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 25 6.3
U58757-12|AAK66021.1| 60|Caenorhabditis elegans Histone h1 lik... 25 6.3
U53341-7|AAC69111.3| 744|Caenorhabditis elegans Hypothetical pr... 25 6.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 25 6.3
AF216291-1|AAF23175.1| 60|Caenorhabditis elegans histone H1.Q ... 25 6.3
AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical ... 25 6.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 25 6.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 25 6.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 25 6.3
Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical p... 25 8.4
Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical pr... 25 8.4
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 25 8.4
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 25 8.4
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 25 8.4
L23648-3|AAN63386.1| 438|Caenorhabditis elegans Cyclin t protei... 25 8.4
L23648-2|AAN63387.1| 183|Caenorhabditis elegans Cyclin t protei... 25 8.4
L23648-1|AAA28034.1| 468|Caenorhabditis elegans Cyclin t protei... 25 8.4
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 25 8.4
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 25 8.4
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 25 8.4
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 25 8.4
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 25 8.4
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 25 8.4
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 35.9 bits (79), Expect = 0.004
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRG 256
++D GS+ V KKGRGRP N + + K+GR A ++ + D +PV K+G
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADT-DAIDTASSPV-KKG 167
Query: 257 RGR 265
RGR
Sbjct: 168 RGR 170
Score = 35.5 bits (78), Expect = 0.006
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGR 265
D +++ KKGRGRP N + + K+GR A + ++ + D +PV K+GRGR
Sbjct: 158 DTASSPVKKGRGRPAKNPSADAGSPLVKKGRGRQAKNLAADT-DAIDTASSPV-KKGRGR 215
Score = 32.3 bits (70), Expect = 0.055
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGRR 268
K+GRGR N S +V G P + S D +P+ K+GRGRR
Sbjct: 95 KRGRGRKAKN--PSADADVNDTGSSPVKKGRGRPIKNPSADAGSPLVKKGRGRR 146
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 125 PKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVA---KRGR 259
P N ++ + V KRGR P + + D E+AP A KRGR
Sbjct: 255 PAVNESEEADEPVLKRGR-SVKQPKDESESDDEDAEKAPAAIPKKRGR 301
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 35.9 bits (79), Expect = 0.004
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRG 256
++D GS+ V KKGRGRP N + + K+GR A ++ + D +PV K+G
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADT-DAIDTASSPV-KKG 167
Query: 257 RGR 265
RGR
Sbjct: 168 RGR 170
Score = 35.5 bits (78), Expect = 0.006
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGR 265
D +++ KKGRGRP N + + K+GR A + ++ + D +PV K+GRGR
Sbjct: 158 DTASSPVKKGRGRPAKNPSADAGSPLVKKGRGRQAKNLAADT-DAIDTASSPV-KKGRGR 215
Score = 32.3 bits (70), Expect = 0.055
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGRR 268
K+GRGR N S +V G P + S D +P+ K+GRGRR
Sbjct: 95 KRGRGRKAKN--PSADADVNDTGSSPVKKGRGRPIKNPSADAGSPLVKKGRGRR 146
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 125 PKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVA---KRGR 259
P N ++ + V KRGR P + + D E+AP A KRGR
Sbjct: 255 PAVNESEEADEPVLKRGR-SVKQPKDESESDDEDAEKAPAAIPKKRGR 301
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical protein
F56C9.10b protein.
Length = 1031
Score = 35.5 bits (78), Expect = 0.006
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGR 265
+ ST + G G + G K +KK+ PPA+AP+ S KSS ++ + GR R
Sbjct: 960 ESSTPFARNGSGSSSSTGATGG-KSLKKKKTPPASAPLPTSSTKSSQKDKK--VQNGRER 1016
Query: 266 RTGS 277
S
Sbjct: 1017 SKDS 1020
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical protein
F56C9.10a protein.
Length = 1028
Score = 35.5 bits (78), Expect = 0.006
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGR 265
+ ST + G G + G K +KK+ PPA+AP+ S KSS ++ + GR R
Sbjct: 957 ESSTPFARNGSGSSSSTGATGG-KSLKKKKTPPASAPLPTSSTKSSQKDKK--VQNGRER 1013
Query: 266 RTGS 277
S
Sbjct: 1014 SKDS 1017
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 33.5 bits (73), Expect = 0.024
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETK--------EVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGR 259
K+GRGRP+ ++ + + E KKRGRP AA ++E A ++ P KRGR
Sbjct: 95 KRGRGRPRKQSSEEKVQIPKVVVKFEPKKRGRPAGAAKWSQEVAVVL--QKQPQRKRGR 151
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 31.5 bits (68), Expect = 0.096
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKR 253
+K + + + + E +EVK++ P ++ TK +A D+E+ PVA +
Sbjct: 190 KKSAKSKDDDSSDEEEEEEVKEKS-PKKSSKSTKRAASDDDEEEEPVATK 238
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 31.5 bits (68), Expect = 0.096
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQ 235
+ +A K+GRGRP++ T S T++ P ++ K S ++ DE+
Sbjct: 565 EAPSAPVKRGRGRPRSRSTMSITED----SEPSTSSTAAKRSKRAESDEE 610
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 30.3 bits (65), Expect = 0.22
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = +2
Query: 74 KMSDDGSTAVEKKGRGRPKANGTQS--ETKEVKKRGRPPAAAPITKESAKSSDDEQAPVA 247
+ SDD AV ++GR R A S ++ A P + S + A
Sbjct: 36 EQSDDTPPAVARRGRNRAAARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRGTTSA 95
Query: 248 KRGRGRRTG 274
+RGRG G
Sbjct: 96 RRGRGSARG 104
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 30.3 bits (65), Expect = 0.22
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Frame = +2
Query: 80 SDDGSTAVEKKGRGRPKANGTQSETK------EVKKRGRP-PAAA---PITKE---SAKS 220
SDD + A + + PK ++E+ E K +P PA A P+ K+ S+ S
Sbjct: 287 SDDEAPAKKTPAKAAPKPVAKKAESSSDSSDDEKKPAAKPTPAKATPKPVAKKAESSSDS 346
Query: 221 SDDEQAPVAKRGRGRRT 271
SDDE+ PVAK + T
Sbjct: 347 SDDEKKPVAKPAPAKAT 363
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
KK ++ ++ K+ + P A + S+ SSDDE+ P AK
Sbjct: 278 KKADSSSDSSDDEAPAKKTPAKAAPKPVAKKAESSSDSSDDEKKPAAK 325
Score = 29.1 bits (62), Expect = 0.51
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +2
Query: 101 VEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKE---SAKSSDDEQAPVAKRGRGRRT 271
V KK + + K P P+ K+ S+ SSDDE+ PVAK + T
Sbjct: 213 VAKKAASSSSDSSDDEKKPAAKPTPAKPTPKPVVKKAESSSDSSDDEKKPVAKPAPAKAT 272
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 155 KEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGRRT 271
K + P A + S+ SSDDE+ PVAK + T
Sbjct: 387 KPTPAKATPKPVAKKAESSSDSSDDEKKPVAKPTSAKAT 425
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = +2
Query: 131 ANGTQSETKEVKKRGRP-PAAA---PITKE---SAKSSDDEQAPVAKRGRGRRT 271
++ + S E K +P PA A P+ K+ S+ SSDDE+ PVAK + T
Sbjct: 494 SSSSDSSDDEKKPAAKPTPANATPKPVAKKAESSSDSSDDEKKPVAKPTSAKAT 547
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 182 PAAAPITKESAKSSDDEQAPVAKRGRGRRT 271
P A S+ SSDDE+ PVAK + T
Sbjct: 609 PTAKKAASSSSDSSDDEKKPVAKPTSAKAT 638
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 182 PAAAPITKESAKSSDDEQAPVAK 250
P A + S+ SSDDE+ P AK
Sbjct: 487 PTAKKVASSSSDSSDDEKKPAAK 509
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +2
Query: 116 RGRPKANGTQSETKEVKK----RGRPPAAAPITKESAKSSDDEQAPVAK 250
+ ++ + E K V K + P A + S+ SSDDE+ P AK
Sbjct: 339 KAESSSDSSDDEKKPVAKPAPAKATPKPVAKKAESSSDSSDDEKKPAAK 387
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
KK ++ ++ K+ + P A+ + S+ SSDDE+ P AK
Sbjct: 431 KKADSSSDSSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEK-PAAK 477
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 29.5 bits (63), Expect = 0.39
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 38 CERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAA--APITKES 211
CE C A + + + S A+E+K R + ET +VK+R PP PI +
Sbjct: 82 CEDCIIAQLDGHLQAK--SAAIEEKKRATAAMLDCELETPKVKERPTPPGVIRCPICSQE 139
Query: 212 AKSSDD 229
+ +D
Sbjct: 140 SHVGND 145
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 0.39
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 95 TAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGRRTG 274
T E+K + +A G S T+ K+ PP+AAPIT++ +S+ AP ++ + R+
Sbjct: 1203 TVEEEKKDVKEEAPGPSSSTESKKE---PPSAAPITRK--ESTTAPVAPAVQQQQQRKES 1257
Query: 275 ST 280
T
Sbjct: 1258 FT 1259
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.5 bits (63), Expect = 0.39
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 95 TAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGRRTG 274
T E+K + +A G S T+ K+ PP+AAPIT++ +S+ AP ++ + R+
Sbjct: 1203 TVEEEKKDVKEEAPGPSSSTESKKE---PPSAAPITRK--ESTTAPVAPAVQQQQQRKES 1257
Query: 275 ST 280
T
Sbjct: 1258 FT 1259
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 28.7 bits (61), Expect = 0.68
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +2
Query: 101 VEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKE---SAKSSDDEQAPVAKRGRGRRT 271
V KK + + K P P+ K+ S+ SSDDE+ PVAK + T
Sbjct: 213 VAKKAASSSSDSSDDEKKPAAKPTPAKPTPKPVVKKAESSSDSSDDEKKPVAKPTSAKAT 272
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 182 PAAAPITKESAKSSDDEQAPVAKRGRGRRT 271
P A S+ SSDDE+ PVAK + T
Sbjct: 334 PTAKKAASSSSDSSDDEKKPVAKPTSAKAT 363
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical protein
ZK524.4 protein.
Length = 1016
Score = 28.3 bits (60), Expect = 0.90
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +2
Query: 26 VTFCCERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITK 205
+T +C E NK DD G+ +GT S T K+ AP +
Sbjct: 799 LTMLSSKCASKFDEKNKKDDDDEANGGTTGKRGNSGSGTTSLTVTGKQSNNQSGIAPQSN 858
Query: 206 ESAKSSDDEQAPV 244
E + +D P+
Sbjct: 859 EKRSTLNDSVLPL 871
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical protein
ZK524.4 protein.
Length = 1016
Score = 28.3 bits (60), Expect = 0.90
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +2
Query: 26 VTFCCERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITK 205
+T +C E NK DD G+ +GT S T K+ AP +
Sbjct: 799 LTMLSSKCASKFDEKNKKDDDDEANGGTTGKRGNSGSGTTSLTVTGKQSNNQSGIAPQSN 858
Query: 206 ESAKSSDDEQAPV 244
E + +D P+
Sbjct: 859 EKRSTLNDSVLPL 871
>AF125460-1|AAD12847.3| 456|Caenorhabditis elegans Hypothetical
protein Y9D1A.1 protein.
Length = 456
Score = 28.3 bits (60), Expect = 0.90
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2
Query: 68 FNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKE 208
+NK ++GS ++ GR P+ +G + + RG P + K+
Sbjct: 77 YNKDDEEGSGRKDRAGRIGPEGSGRKDRNETTMVRGSPETWTMVRKD 123
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +2
Query: 74 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPI---TKESAKSSDDEQAPV 244
K ++GS ++ GR RP+ +G + + RG P I E D +
Sbjct: 35 KDDEEGSGRKDRAGRIRPEGSGRKDWDETTMVRGSPETWTMIYNKDDEEGSGRKDRAGRI 94
Query: 245 AKRGRGRR 268
G GR+
Sbjct: 95 GPEGSGRK 102
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 68 FNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRP 181
+NK ++GS ++ GR P+ +G + + RG P
Sbjct: 242 YNKDDEEGSGRKDRAGRVGPEGSGRKDRDETTMVRGSP 279
>AF017812-1|AAB70559.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 28.3 bits (60), Expect = 0.90
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVK--KRGRPPAAAPITKESAKSSDDEQAPVAK 250
EKK + A T + K+ K K+ PAA + K AK + ++AP K
Sbjct: 135 EKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAKKAAPKKAPAKK 185
>AF017811-1|AAB70666.1| 191|Caenorhabditis elegans histone H1.2
protein.
Length = 191
Score = 28.3 bits (60), Expect = 0.90
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVK--KRGRPPAAAPITKESAKSSDDEQAPVAK 250
EKK + A T + K+ K K+ PAA + K AK + ++AP K
Sbjct: 135 EKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAKKAAPKKAPAKK 185
>AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 like
protein 2, isoformb protein.
Length = 173
Score = 28.3 bits (60), Expect = 0.90
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVK--KRGRPPAAAPITKESAKSSDDEQAPVAK 250
EKK + A T + K+ K K+ PAA + K AK + ++AP K
Sbjct: 117 EKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAKKAAPKKAPAKK 167
>AC084197-2|AAM44399.1| 241|Caenorhabditis elegans Histone h1 like
protein 2, isoforma protein.
Length = 241
Score = 28.3 bits (60), Expect = 0.90
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVK--KRGRPPAAAPITKESAKSSDDEQAPVAK 250
EKK + A T + K+ K K+ PAA + K AK + ++AP K
Sbjct: 185 EKKAKKTTVAKKTGDKVKKAKSPKKIAKPAAKKVAKSPAKKAAPKKAPAKK 235
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 28.3 bits (60), Expect = 0.90
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 80 SDDGS-TAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRG 256
SD GS ++ KK R + EV AAAP ESA + + VA +
Sbjct: 166 SDGGSKSSSSKKNDARGPSEAPSEAGSEVSSVTTASAAAPTVSESASVAAKPERKVAGKK 225
Query: 257 RGRR 268
G+R
Sbjct: 226 TGKR 229
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 89 GSTAVEKKGRGRPKANGTQSETKEV------KKRGRPPAAAPITKESAKSSDDEQAPVAK 250
GS+++E K G+ K N SE+ + K+R R + + + S SDDE P
Sbjct: 621 GSSSLESKN-GKKKKNFNMSESSDDETSNSRKRRKRESSESQSSSSSDDDSDDEDRPSIP 679
Query: 251 RGRGR 265
R G+
Sbjct: 680 RKSGQ 684
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 28.3 bits (60), Expect = 0.90
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 80 SDDGS-TAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRG 256
SD GS ++ KK R + EV AAAP ESA + + VA +
Sbjct: 166 SDGGSKSSSSKKNDARGPSEAPSEAGSEVSSVTTASAAAPTVSESASVAAKPERKVAGKK 225
Query: 257 RGRR 268
G+R
Sbjct: 226 TGKR 229
Score = 27.9 bits (59), Expect = 1.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 89 GSTAVEKKGRGRPKANGTQSETKEV------KKRGRPPAAAPITKESAKSSDDEQAPVAK 250
GS+++E K G+ K N SE+ + K+R R + + + S SDDE P
Sbjct: 621 GSSSLESKN-GKKKKNFNMSESSDDETSNSRKRRKRESSESQSSSSSDDDSDDEDRPSIP 679
Query: 251 RGRGR 265
R G+
Sbjct: 680 RKSGQ 684
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 143 QSETKEVKKRGRPPAAAPITKESAKSS--DDEQAPVAKRGRG 262
+++ KE++++ P API KSS + +Q PV G G
Sbjct: 736 EAKEKEMREKAAQPIQAPIGLSMPKSSRKEPKQTPVTSDGNG 777
>Z68882-10|CAA93111.1| 397|Caenorhabditis elegans Hypothetical
protein C47E12.7 protein.
Length = 397
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 158 EVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGRRT 271
++KKR R A A + DDE A V K+G G++T
Sbjct: 327 QIKKRAREAAEAARQENGDDVPDDEIAEV-KKGNGKKT 363
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
D + ++K+ +N S+ V PPAA KES + + +E V K
Sbjct: 640 DSNDKIDKEPNASSTSNDETSKDDTVPMESDPPAATEKPKESTEITTEEPLEVDK 694
>AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical
protein Y71F9AL.9 protein.
Length = 314
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 113 GRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSS 223
G +P ANG + + PPAA PI +++SS
Sbjct: 172 GSSKPVANGKPAAAPTKQAVSPPPAAGPIKHATSQSS 208
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDD 229
D S E++ +G A Q + +E K R + PAA P ++E+ + DD
Sbjct: 230 DESKGEEEEDQGVRPAQKRQVKQQE-KPRKQKPAAPPSSEENEEDEDD 276
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDD 229
D S E++ +G A Q + +E K R + PAA P ++E+ + DD
Sbjct: 230 DESKGEEEEDQGVRPAQKRQVKQQE-KPRKQKPAAPPSSEENEEDEDD 276
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 134 NGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRG 256
NG S ++ KR R + P SAK D+Q +RG
Sbjct: 356 NGASSSSRSQIKRSRQRSETPPMVPSAKRRKDDQKQKLRRG 396
>AF125965-3|AAD14757.1| 266|Caenorhabditis elegans Hypothetical
protein H43I07.1 protein.
Length = 266
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 41 ERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSE--TKEVKKRGRPPAAAPITKESA 214
+R +F+ F+K + D S + P+ + + T+ +K+R + ++ PI ++
Sbjct: 136 KRNFFSQLGFSKENGDESPPKPSQQAPPPEKPSEEKKPATESLKQRFQRISSLPIDAAAS 195
Query: 215 KSSDDEQAPVAKRG 256
DDE+ V +RG
Sbjct: 196 LILDDEEYLVVRRG 209
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +2
Query: 134 NGTQSETKEV-KKRGRPPAAAP----ITKESAKSSDDEQAPVAKRGRGRRTGS 277
N + E +E KK+G+ P + +ES +SSDDE+ A+ G T S
Sbjct: 607 NEEEEEVEESPKKKGKTPRKSSKKSAAKEESEESSDDEEEEQAEETNGSHTES 659
>Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.4 protein.
Length = 898
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 137 GTQSETKEVKKRGRPPAAAPITKESAKSSDDEQA 238
G SE+K K G+P A ++ + S DD+ +
Sbjct: 186 GEVSESKAEKSPGKPSEKAAVSDSDSDSDDDDSS 219
>Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical
protein T19C4.1 protein.
Length = 424
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 59 LFEFNKMSDDGSTAVEKKGRGRPK-ANGTQSETKEVKKRGRPPAAAPITKESAKS 220
++ ++ S + A K GR RP+ A GT + +++ GRPP A+ S+ S
Sbjct: 92 VYATDEFSPPSAPATPKIGRTRPESAAGTMTREQKL-TWGRPPPASHFRSASSMS 145
>Z68752-11|CAM82780.1| 324|Caenorhabditis elegans Hypothetical
protein T12G3.7b protein.
Length = 324
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQ----APVAKR 253
D + K+ R P + RG P P+ ++ S+D+EQ PVA+
Sbjct: 182 DEADGAAKEDRETPAVGAEGLHEAVEEARGNPAPGVPVAEKKKDSADEEQTLEAGPVARP 241
Query: 254 GR 259
R
Sbjct: 242 HR 243
>Z68752-10|CAA92986.1| 354|Caenorhabditis elegans Hypothetical
protein T12G3.7a protein.
Length = 354
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQ----APVAKR 253
D + K+ R P + RG P P+ ++ S+D+EQ PVA+
Sbjct: 212 DEADGAAKEDRETPAVGAEGLHEAVEEARGNPAPGVPVAEKKKDSADEEQTLEAGPVARP 271
Query: 254 GR 259
R
Sbjct: 272 HR 273
>AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical
protein Y56A3A.7b protein.
Length = 570
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 155 KEVKKRGRPPAAAPITKESAKSSDDEQAPV 244
+E +K PPAAAP E + +DE++ +
Sbjct: 448 EEDEKLKLPPAAAPSLNEDSVDDEDEESDI 477
>AL023840-2|CAM82781.1| 324|Caenorhabditis elegans Hypothetical
protein T12G3.7b protein.
Length = 324
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQ----APVAKR 253
D + K+ R P + RG P P+ ++ S+D+EQ PVA+
Sbjct: 182 DEADGAAKEDRETPAVGAEGLHEAVEEARGNPAPGVPVAEKKKDSADEEQTLEAGPVARP 241
Query: 254 GR 259
R
Sbjct: 242 HR 243
>AL023840-1|CAA19510.1| 354|Caenorhabditis elegans Hypothetical
protein T12G3.7a protein.
Length = 354
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQ----APVAKR 253
D + K+ R P + RG P P+ ++ S+D+EQ PVA+
Sbjct: 212 DEADGAAKEDRETPAVGAEGLHEAVEEARGNPAPGVPVAEKKKDSADEEQTLEAGPVARP 271
Query: 254 GR 259
R
Sbjct: 272 HR 273
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKES 211
E + R R G + ETKEV +PP++ P+ ES
Sbjct: 1990 EVRVRARTTELGPE-ETKEVSTEQQPPSSPPLNLES 2024
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKES 211
E + R R G + ETKEV +PP++ P+ ES
Sbjct: 1990 EVRVRARTTELGPE-ETKEVSTEQQPPSSPPLNLES 2024
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDE 232
+FNK++DD E+ G N + PP IT S++ ++E
Sbjct: 39 QFNKITDDDDGETEEADGGETTENSSPERRGRRNIPTEPPFRVQITNISSQHVEEE 94
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKES 211
E + R R G + ETKEV +PP++ P+ ES
Sbjct: 1990 EVRVRARTTELGPE-ETKEVSTEQQPPSSPPLNLES 2024
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKES 211
E + R R G + ETKEV +PP++ P+ ES
Sbjct: 1990 EVRVRARTTELGPE-ETKEVSTEQQPPSSPPLNLES 2024
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 110 KGRGRPKA-NGTQSETKEVKKRGRPPAAAPITKESAKSS 223
+GRGRP N T KKR P AA + ES +S
Sbjct: 229 RGRGRPPGPNATPKAAASEKKRAAKPKAA-VNPESIAAS 266
>Z70036-2|CAE17914.1| 155|Caenorhabditis elegans Hypothetical
protein T01B4.3 protein.
Length = 155
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 71 NKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDE 232
+K D G AV + + K NG ETK+ +R + + ++ +SSDDE
Sbjct: 102 SKEKDPGLAAVVEDEKSAKK-NGRFKETKQKMERFKKLRRSKDRQQLIESSDDE 154
>U40028-5|AAA81116.1| 137|Caenorhabditis elegans Hmg protein 11
protein.
Length = 137
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 104 EKKGRGRPKAN 136
EKKGRGRPK N
Sbjct: 127 EKKGRGRPKKN 137
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 83 DDGSTAVEKKGRGRPKANGTQSETKEVK--KRGRPPAAAPITKESAKSSDDEQAPVAKRG 256
D+ + KKG + + ++SE+++ K K+ + + + KES S+DE AP K+
Sbjct: 189 DEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKES--ESEDE-APEKKKT 245
Query: 257 RGRRTGST 280
R+ T
Sbjct: 246 EKRKRSKT 253
>AF056578-1|AAC78600.1| 137|Caenorhabditis elegans high mobility
group protein I alpha protein.
Length = 137
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 104 EKKGRGRPKAN 136
EKKGRGRPK N
Sbjct: 127 EKKGRGRPKKN 137
>AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical
protein T07A9.8 protein.
Length = 343
Score = 25.8 bits (54), Expect = 4.8
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 74 KMSDDGSTAVEKKGRG-RPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
K + S A +KK R R K ++ K+ P P+ E SSD+ K
Sbjct: 34 KPTSSQSDAEKKKKRPWRNKVRKLAAKKAAADKKSENPEEPPLILEPKSSSDENTKKKRK 93
Query: 251 RG 256
RG
Sbjct: 94 RG 95
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 83 DDGSTAVEKKGRGRPKANGTQSETKEVK--KRGRPPAAAPITKESAKSSDDEQAPVAKRG 256
D+ + KKG + + ++SE+++ K K+ + + + KES S+DE AP K+
Sbjct: 189 DEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKES--ESEDE-APEKKKT 245
Query: 257 RGRRTGST 280
R+ T
Sbjct: 246 EKRKRSKT 253
>Z77136-3|CAB00886.1| 252|Caenorhabditis elegans Hypothetical
protein ZC376.4 protein.
Length = 252
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 110 KGRGRPKANGTQSE-TKEVKKRGRPPAAAPITKESAKSSDDEQ 235
+ R R K G +E + E+ KRGR +S+DD Q
Sbjct: 66 RDRERRKRKGDDNEDSSEISKRGRVTCGLDYKNHEEESTDDFQ 108
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/56 (23%), Positives = 23/56 (41%)
Frame = +2
Query: 74 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAP 241
+M T++ GR NG Q+ + + PP A P ++ ++ Q P
Sbjct: 555 QMPAASGTSISVPVNGRHNVNGKQASIESLSDPPPPPYAPPSPPRASSAAAAHQQP 610
>U58757-12|AAK66021.1| 60|Caenorhabditis elegans Histone h1 like
protein 7, isoformc protein.
Length = 60
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 AVEK-KGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
AV+K K + K + + +VKK AAAP K+ K + +++P K
Sbjct: 3 AVQKAKKVAKTKKVAAKPKAPKVKKASPKKAAAPKAKKPVKKAAAKKSPAKK 54
>U53341-7|AAC69111.3| 744|Caenorhabditis elegans Hypothetical
protein F49E10.1 protein.
Length = 744
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 53 FALFEFNKMSDDGSTAVEKKGRGRPKANGTQS 148
FAL ++D S E++ RGR KA GT S
Sbjct: 272 FALEHDLMLTDTKSNDSEEQSRGRKKAAGTTS 303
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 80 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
S D +K +P A+ T+ +EVK A+P KE + ++++ ++P K
Sbjct: 1378 SPDKKEKSPEKTEEKP-ASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKK 1433
>AF216291-1|AAF23175.1| 60|Caenorhabditis elegans histone H1.Q
protein.
Length = 60
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 AVEK-KGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
AV+K K + K + + +VKK AAAP K+ K + +++P K
Sbjct: 3 AVQKAKKVAKTKKVAAKPKAPKVKKASPKKAAAPKAKKPVKKAAAKKSPAKK 54
>AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical
protein B0348.5 protein.
Length = 254
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 83 DDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSS 223
DD + A +K G P T+ K K + AAAP + + ++
Sbjct: 194 DDAAKANKKTTTGSPSTTSTRKPRKARKPTKKTVAAAPSSSSNTSTT 240
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 80 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
S D +K +P A+ T+ +EVK A+P KE + ++++ ++P K
Sbjct: 1378 SPDKKEKSPEKTEEKP-ASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKK 1433
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 80 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
S D +K +P A+ T+ +EVK A+P KE + ++++ ++P K
Sbjct: 1378 SPDKKEKSPEKTEEKP-ASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKK 1433
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 80 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAK 250
S D +K +P A+ T+ +EVK A+P KE + ++++ ++P K
Sbjct: 1378 SPDKKEKSPEKTEEKP-ASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKK 1433
>Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQA 238
+SD + K+ +++ KE KK+G A K + S DDE +
Sbjct: 52 VSDPTKKGTTMSTMSQVKSTKSKNHKKEEKKKGSKNDEADSKKPDSASKDDESS 105
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/68 (26%), Positives = 26/68 (38%)
Frame = +2
Query: 74 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKR 253
K D GS+ EK +G P G + E E G P + + K +D P +
Sbjct: 143 KKGDKGSSG-EKGEKGSPGQKGDKGEKGEKGSNGSPGSKG---DKGEKGADGNPGPKGDK 198
Query: 254 GRGRRTGS 277
G G+
Sbjct: 199 GADGAKGA 206
>Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical
protein F25H2.6 protein.
Length = 573
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 20 ITVTFCCERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKR 172
I VT C+ +F EF+ S +G T +++ K NG +E KK+
Sbjct: 266 IDVTSDCDE-FFDADEFDVDSKNGDTVEKRQEEVEDKKNGNIVVPEEEKKK 315
>Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQA 238
+SD + K+ +++ KE KK+G A K + S DDE +
Sbjct: 52 VSDPTKKGTTMSTMSQVKSTKSKNHKKEEKKKGSKNDEADSKKPDSASKDDESS 105
>Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical
protein C11G6.1 protein.
Length = 643
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 95 TAVEKKGR-GRPKANGTQSETKEVKKRGRPPAAAPITKESAKS 220
T + KG GRPK + K +GRPP A + K S
Sbjct: 386 TPTKVKGLPGRPKKPKPEGVVTVPKPKGRPPKKATLEKRKRLS 428
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 71 NKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQ 235
NK++ D EKK + K +S T KK A+ T E KS D +
Sbjct: 620 NKVNHDEPKKEEKKNEEQVKETKLESSTTVAKKEDVTTVAS--TTEEPKSDKDSE 672
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = +2
Query: 119 GRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGRRTG 274
G+ +N S++ K + P A DD KR GRRTG
Sbjct: 2 GQQLSNRRNSQSVGATKNAKTPKPKEGGNPDAADDDDIIVEPPKRSGGRRTG 53
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETKEVKKRGRPPAAAPITKESAKSSDDEQAPVAKRGRGRRTGST 280
+K P A+ ++E++ ++KR PP + +E K S D++ ++ R RR +T
Sbjct: 115 QKSSSSPSAS--KAESRPLRKRISPPPSE--NREKEKQSRDKERRRSRSPRDRRGRAT 168
>L23648-3|AAN63386.1| 438|Caenorhabditis elegans Cyclin t protein
1.1, isoform b protein.
Length = 438
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAP 196
D ST+ EK+ R P AN S + + PP P
Sbjct: 357 DSSTSSEKRARIDPLANNFVSSSSSSNGKLAPPPIPP 393
>L23648-2|AAN63387.1| 183|Caenorhabditis elegans Cyclin t protein
1.1, isoform c protein.
Length = 183
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAP 196
D ST+ EK+ R P AN S + + PP P
Sbjct: 72 DSSTSSEKRARIDPLANNFVSSSSSSNGKLAPPPIPP 108
>L23648-1|AAA28034.1| 468|Caenorhabditis elegans Cyclin t protein
1.1, isoform a protein.
Length = 468
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAP 196
D ST+ EK+ R P AN S + + PP P
Sbjct: 357 DSSTSSEKRARIDPLANNFVSSSSSSNGKLAPPPIPP 393
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 173 GRPPAAAPITKESAKSSDDEQAP 241
G P A+AP + S S+ D++AP
Sbjct: 57 GAPEASAPAQEASEASAPDQEAP 79
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 173 GRPPAAAPITKESAKSSDDEQAP 241
G P A+AP + S S+ D++AP
Sbjct: 94 GAPEASAPAQEASEASAPDQEAP 116
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 25.0 bits (52), Expect = 8.4
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVK---KRGRP--------PAAAPITKESAKSSDDE 232
+G +A KKG P+ N S + E K + G P AAAP + S K + D
Sbjct: 767 EGDSADGKKGDS-PEYNDVSSTSNEEKFDSRNGAPVTNENGGVEAAAPTVEISRKRTSDG 825
Query: 233 QAPVAKRGRGRRT 271
P AKR R T
Sbjct: 826 IDPDAKRIRTEET 838
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 25.0 bits (52), Expect = 8.4
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVK---KRGRP--------PAAAPITKESAKSSDDE 232
+G +A KKG P+ N S + E K + G P AAAP + S K + D
Sbjct: 1003 EGDSADGKKGDS-PEYNDVSSTSNEEKFDSRNGAPVTNENGGVEAAAPTVEISRKRTSDG 1061
Query: 233 QAPVAKRGRGRRT 271
P AKR R T
Sbjct: 1062 IDPDAKRIRTEET 1074
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 173 GRPPAAAPITKESAKSSDDEQAP 241
G P A+AP + S S+ D++AP
Sbjct: 94 GAPEASAPAQEASEASAPDQEAP 116
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 173 GRPPAAAPITKESAKSSDDEQAP 241
G P A+AP + S S+ D++AP
Sbjct: 94 GAPEASAPAQEASEASAPDQEAP 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,265,034
Number of Sequences: 27780
Number of extensions: 86398
Number of successful extensions: 618
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -