Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D09
         (281 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   0.71 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   2.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          20   6.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          20   6.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          20   6.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          20   6.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          20   6.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          20   6.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          20   6.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    20   6.7  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      19   8.8  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 0.71
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 83  DDGSTAVEKKGRGRPKANGTQSETKEVKKRGR 178
           +D  T +E+ GRG+ + +G          RGR
Sbjct: 69  NDKKTDIEETGRGKGRGHGKGGSRGRGGNRGR 100


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   RGSLADYCNVLL*TLLFC 57
           R +L DYCN++  T L C
Sbjct: 355 RSALEDYCNIVA-THLVC 371


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 73  IKFEKSKITTFTAKRYSNRPKSL 5
           +  EKS+  T T K+Y+    SL
Sbjct: 195 VNIEKSENETKTCKKYAISSNSL 217


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 73  IKFEKSKITTFTAKRYSNRPKSL 5
           +  EKS+  T T K+Y+    SL
Sbjct: 195 VNIEKSENETKTCKKYAISSNSL 217


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 73  IKFEKSKITTFTAKRYSNRPKSL 5
           +  EKS+  T T K+Y+    SL
Sbjct: 195 VNIEKSENETKTCKKYAISSNSL 217


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 73  IKFEKSKITTFTAKRYSNRPKSL 5
           +  EKS+  T T K+Y+    SL
Sbjct: 195 VNIEKSENETKTCKKYAISSNSL 217


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 73  IKFEKSKITTFTAKRYSNRPKSL 5
           +  EKS+  T T K+Y+    SL
Sbjct: 195 VNIEKSENETKTCKKYAISSNSL 217


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 73  IKFEKSKITTFTAKRYSNRPKSL 5
           +  EKS+  T T K+Y+    SL
Sbjct: 195 VNIEKSENETKTCKKYAISSNSL 217


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 73  IKFEKSKITTFTAKRYSNRPKSL 5
           +  EKS+  T T K+Y+    SL
Sbjct: 195 VNIEKSENETKTCKKYAISSNSL 217


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 73  IKFEKSKITTFTAKRYSNRPKSL 5
           +  EKS+  T T K+Y+    SL
Sbjct: 195 VNIEKSENETKTCKKYAISSNSL 217


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 207 SFVIGAAAGGLPLFFTSLVSDCVPFAFGLPRPFFST 100
           S V   AAGG  L F   + +  P    LP P   T
Sbjct: 128 SHVRALAAGGNHLPFHEKLVESFPRGGSLPTPVTPT 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,870
Number of Sequences: 438
Number of extensions: 896
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)