Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_D07
(328 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ088673-1|AAY88966.1| 355|Homo sapiens hypothetical protein FL... 31 0.83
AK023673-1|BAB14633.1| 354|Homo sapiens n. protein. 31 0.83
BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein. 29 3.3
BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protei... 29 3.3
BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protei... 29 3.3
AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protei... 29 3.3
AF165161-1|AAD45157.1| 1269|Homo sapiens FLASH protein. 29 3.3
AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25 pro... 29 3.3
AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein. 29 3.3
AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein. 29 3.3
AJ579136-1|CAE45390.1| 121|Homo sapiens immunoglobulin heavy ch... 29 4.4
AJ579117-1|CAE45371.1| 121|Homo sapiens immunoglobulin heavy ch... 29 4.4
AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN... 28 7.7
AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN... 28 7.7
AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein. 28 7.7
>DQ088673-1|AAY88966.1| 355|Homo sapiens hypothetical protein
FLJ13611 protein.
Length = 355
Score = 31.1 bits (67), Expect = 0.83
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 88 NMYHQLSRVTGRIVAASNLQSPLFPVAPIALQRVD-PPTIQYNTNHFSTVTEEAAC-STS 261
N LS VT + + +Q+ +P+ +++V P+I YN ++V++ C ST
Sbjct: 117 NAESDLSSVTDEVFLEAQIQN--MTTSPMFMEKVSLEPSIMYNVTELNSVSQAGECVSTF 174
Query: 262 GKRKLIPGTNT 294
G R + +T
Sbjct: 175 GSRAYLQPMDT 185
>AK023673-1|BAB14633.1| 354|Homo sapiens n. protein.
Length = 354
Score = 31.1 bits (67), Expect = 0.83
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 88 NMYHQLSRVTGRIVAASNLQSPLFPVAPIALQRVD-PPTIQYNTNHFSTVTEEAAC-STS 261
N LS VT + + +Q+ +P+ +++V P+I YN ++V++ C ST
Sbjct: 117 NAESDLSSVTDEVFLEAQIQN--MTTSPMFMEKVSLEPSIMYNVTELNSVSQAGECVSTF 174
Query: 262 GKRKLIPGTNT 294
G R + +T
Sbjct: 175 GSRAYLQPMDT 185
>BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein.
Length = 1981
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 AASNLQSPLFPVAPIALQRVDPPTIQ-YNTNHFSTVTEEAACSTS 261
A S L SP+ PVA + L+ PP + YN +H +A STS
Sbjct: 856 AISPLNSPVRPVAKV-LRNESPPQVPVYNNSHKDVFLPNSAHSTS 899
>BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protein 2
protein.
Length = 1982
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 AASNLQSPLFPVAPIALQRVDPPTIQ-YNTNHFSTVTEEAACSTS 261
A S L SP+ PVA + L+ PP + YN +H +A STS
Sbjct: 856 AISPLNSPVRPVAKV-LRNESPPQVPVYNNSHKDVFLPNSAHSTS 899
>BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protein 2
protein.
Length = 1982
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 AASNLQSPLFPVAPIALQRVDPPTIQ-YNTNHFSTVTEEAACSTS 261
A S L SP+ PVA + L+ PP + YN +H +A STS
Sbjct: 856 AISPLNSPVRPVAKV-LRNESPPQVPVYNNSHKDVFLPNSAHSTS 899
>AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protein 2
protein.
Length = 1964
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 AASNLQSPLFPVAPIALQRVDPPTIQ-YNTNHFSTVTEEAACSTS 261
A S L SP+ PVA + L+ PP + YN +H +A STS
Sbjct: 856 AISPLNSPVRPVAKV-LRNESPPQVPVYNNSHKDVFLPNSAHSTS 899
>AF165161-1|AAD45157.1| 1269|Homo sapiens FLASH protein.
Length = 1269
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 AASNLQSPLFPVAPIALQRVDPPTIQ-YNTNHFSTVTEEAACSTS 261
A S L SP+ PVA + L+ PP + YN +H +A STS
Sbjct: 143 AISPLNSPVRPVAKV-LRNESPPQVPVYNNSHKDVFLPNSAHSTS 186
>AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25
protein.
Length = 1982
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 AASNLQSPLFPVAPIALQRVDPPTIQ-YNTNHFSTVTEEAACSTS 261
A S L SP+ PVA + L+ PP + YN +H +A STS
Sbjct: 856 AISPLSSPVRPVAKV-LRNESPPQVPVYNNSHKDVFLPNSAHSTS 899
>AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein.
Length = 1982
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 AASNLQSPLFPVAPIALQRVDPPTIQ-YNTNHFSTVTEEAACSTS 261
A S L SP+ PVA + L+ PP + YN +H +A STS
Sbjct: 856 AISPLNSPVRPVAKV-LRNESPPQVPVYNNSHKDVFLPNSAHSTS 899
>AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein.
Length = 1981
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 130 AASNLQSPLFPVAPIALQRVDPPTIQ-YNTNHFSTVTEEAACSTS 261
A S L SP+ PVA + L+ PP + YN +H +A STS
Sbjct: 856 AISPLNSPVRPVAKV-LRNESPPQVPVYNNSHKDVFLPNSAHSTS 899
>AJ579136-1|CAE45390.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 238 RLQLKNGWYYTVWSEGPLVAM 176
R + +GWYY W +G LV +
Sbjct: 99 RTRYSSGWYYDYWGQGTLVTV 119
>AJ579117-1|CAE45371.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 28.7 bits (61), Expect = 4.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 238 RLQLKNGWYYTVWSEGPLVAM 176
R + +GWYY W +G LV +
Sbjct: 99 RTRYSSGWYYDYWGQGTLVTV 119
>AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 216 QPFFNCNRRGCLFHFRQEEAYSRHQYPLWT 305
+ F+ + RGCL + +Q+E S + LWT
Sbjct: 269 EALFSKSSRGCLQNEKQDETLSSSEITLWT 298
>AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 216 QPFFNCNRRGCLFHFRQEEAYSRHQYPLWT 305
+ F+ + RGCL + +Q+E S + LWT
Sbjct: 269 EALFSKSSRGCLQNEKQDETLSSSEITLWT 298
>AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein.
Length = 726
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 216 QPFFNCNRRGCLFHFRQEEAYSRHQYPLWT 305
+ F+ + RGCL + +Q+E S + LWT
Sbjct: 167 EALFSKSSRGCLQNEKQDETLSSSEITLWT 196
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,664,313
Number of Sequences: 237096
Number of extensions: 1197397
Number of successful extensions: 2940
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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