Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D06
         (303 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O82966 Cluster: ORF C6; n=2; root|Rep: ORF C6 - Ralston...    33   1.3  
UniRef50_Q5TSI7 Cluster: ENSANGP00000027961; n=1; Anopheles gamb...    31   3.8  
UniRef50_Q5T749 Cluster: Keratinocyte proline-rich protein; n=97...    31   3.8  
UniRef50_Q8YVM1 Cluster: Alr1954 protein; n=4; Nostocaceae|Rep: ...    31   5.1  
UniRef50_Q5B6T7 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_UPI00004D832D Cluster: zinc finger protein 800; n=1; Xe...    31   6.7  
UniRef50_UPI0000DC23BA Cluster: UPI0000DC23BA related cluster; n...    31   6.7  
UniRef50_Q4SI51 Cluster: Chromosome 5 SCAF14581, whole genome sh...    31   6.7  
UniRef50_Q3EZV0 Cluster: DNA gyrase subunit B; n=1; Bacillus thu...    31   6.7  
UniRef50_Q1NC05 Cluster: Conjugal transfer protein trbe; n=1; Sp...    31   6.7  
UniRef50_Q0V4X2 Cluster: Predicted protein; n=1; Phaeosphaeria n...    31   6.7  
UniRef50_P36286 Cluster: Non-structural polyprotein [Contains: U...    31   6.7  
UniRef50_Q9USK0 Cluster: Inositol-pentakisphosphate 2-kinase (EC...    31   6.7  
UniRef50_A6FNM3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  
UniRef50_Q5Z770 Cluster: Putative uncharacterized protein P0421H...    30   8.8  
UniRef50_Q9VHP9 Cluster: CG31258-PA; n=2; Drosophila melanogaste...    30   8.8  

>UniRef50_O82966 Cluster: ORF C6; n=2; root|Rep: ORF C6 - Ralstonia
           solanacearum (Pseudomonas solanacearum)
          Length = 364

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = -2

Query: 272 SGRARTRPIYRELAQVLQQNN-SNRCCRLHRSQCPSRRGMKSGIEYHQL--WVVQSPPAD 102
           SGR  T P YR+L Q+          C   R  C + +G  +G++  Q   W ++ PP D
Sbjct: 272 SGRPETAPAYRQLRQIRSMPTVIGGACTSTRCTCYTAQGTDAGLDDMQCREW-IRKPPFD 330

Query: 101 --RAVRLSREPL 72
             R  + ++EP+
Sbjct: 331 PYREPQAAQEPI 342


>UniRef50_Q5TSI7 Cluster: ENSANGP00000027961; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000027961 - Anopheles gambiae
           str. PEST
          Length = 330

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 108 WRRLYNPQLMILYS*LHSTTGRTLTPVETTTTIR 209
           W++  N  LM+ Y+  HSTTG+T T +    TIR
Sbjct: 297 WKKDLNEYLMMYYTTPHSTTGKTPTELMFGRTIR 330


>UniRef50_Q5T749 Cluster: Keratinocyte proline-rich protein; n=97;
           Theria|Rep: Keratinocyte proline-rich protein - Homo
           sapiens (Human)
          Length = 579

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 23/56 (41%), Positives = 28/56 (50%)
 Frame = -2

Query: 209 SNRCCRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRES 42
           ++RC R   S C  RRG K  IE      + SP   R V   R P+E  PPI+R S
Sbjct: 306 NSRCPRRPISSCSQRRGPKCRIE------ISSPCCPRQVPPQRCPVEI-PPIRRRS 354


>UniRef50_Q8YVM1 Cluster: Alr1954 protein; n=4; Nostocaceae|Rep:
           Alr1954 protein - Anabaena sp. (strain PCC 7120)
          Length = 138

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 62  PPIQRESTGNAYRRPLVAPR 3
           PPI RE +GNA  RP+V PR
Sbjct: 117 PPISRERSGNAPPRPVVKPR 136


>UniRef50_Q5B6T7 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 1202

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
 Frame = -2

Query: 188 HRSQCPSRRGMKSGIEYHQLWVVQS--PPADRAVRLSREPLEPGPPIQRESTGNAYRRPL 15
           H+S  PS  G  S  +YHQ W       P   A  L   P  P PP     T + +   L
Sbjct: 116 HQSSIPSYGGGVSSGDYHQQWASNPTYAPQQPATSLPPPPPPPPPPPVTVDTSSYHNPAL 175

Query: 14  VAP 6
             P
Sbjct: 176 SVP 178


>UniRef50_UPI00004D832D Cluster: zinc finger protein 800; n=1;
           Xenopus tropicalis|Rep: zinc finger protein 800 -
           Xenopus tropicalis
          Length = 465

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -2

Query: 254 RPIYRELAQVLQQNNSNRCCRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADRA-VRLSRE 78
           R ++R L  ++         +LH  +CPS    K G E   L     P AD++ + +  E
Sbjct: 51  RSLFRGLPNLITHKQFYCLSKLHMEECPSTENDKPGQEMKDLLETIYPKADKSELVIQLE 110

Query: 77  PLE 69
           P++
Sbjct: 111 PIQ 113


>UniRef50_UPI0000DC23BA Cluster: UPI0000DC23BA related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC23BA UniRef100 entry -
           Rattus norvegicus
          Length = 91

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 90  TNSPISWRRLY-NPQLMILYS*LHSTTGRTLTPVETTTT 203
           TNS ISWR +Y       LY   H+TT  T T   TTTT
Sbjct: 19  TNSIISWRSIYIYCSTKFLYY-THTTTTTTTTTTTTTTT 56


>UniRef50_Q4SI51 Cluster: Chromosome 5 SCAF14581, whole genome shotgun
            sequence; n=2; Tetraodontidae|Rep: Chromosome 5
            SCAF14581, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 1716

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 113  PPADRAVRLSREPLEPGPPIQRESTGNAYRRPLVAP 6
            PPA+ A+  S EP+   PP+ +E  G A  +  V P
Sbjct: 909  PPAEPAITRSSEPVREDPPVIQEPPGYAAYQHTVQP 944


>UniRef50_Q3EZV0 Cluster: DNA gyrase subunit B; n=1; Bacillus
           thuringiensis serovar israelensis ATCC 35646|Rep: DNA
           gyrase subunit B - Bacillus thuringiensis serovar
           israelensis ATCC 35646
          Length = 726

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -2

Query: 263 ARTRPIYRELAQVLQQ-NNSNRCCRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADRAVRL 87
           A  R   +E A++L++   ++R  +L     PS+   +  ++  +LW+V+   A  +V+ 
Sbjct: 430 AELRITLQEQAKMLREVKKTSRTRKLPEKFLPSKLFKEKIVKKSELWIVEGDSAKTSVKN 489

Query: 86  SREPL 72
           +R+PL
Sbjct: 490 ARDPL 494


>UniRef50_Q1NC05 Cluster: Conjugal transfer protein trbe; n=1;
           Sphingomonas sp. SKA58|Rep: Conjugal transfer protein
           trbe - Sphingomonas sp. SKA58
          Length = 143

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = -2

Query: 272 SGRARTRPIYRELAQVLQQNNSNRCCRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADRAV 93
           S R R RP  + + + LQ   ++   R HR+  P RR   +     + + +QS   +R  
Sbjct: 6   SRRDRDRPRQQRVFRALQDRTAHPGSRRHRAAPPGRRSCAASARGKRHYYLQSARGNRLF 65

Query: 92  RLSREPL 72
            L   P+
Sbjct: 66  ELGLGPI 72


>UniRef50_Q0V4X2 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 187

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -2

Query: 137 HQLWVVQSPPADRAVRLSREPLEPGPPIQRESTG-NAYRRPLVA 9
           H LW+ + PP  R    S  P  P P   R +   + Y+ PL A
Sbjct: 81  HNLWLKRPPPPQRPAPFSLGPASPSPKDARSARPVSGYKYPLFA 124


>UniRef50_P36286 Cluster: Non-structural polyprotein [Contains:
           Unknown protein; Helicase (2C- like protein) (P2C);
           3A-like protein; Viral genome-linked protein (VPg);
           Thiol protease P3C (EC 3.4.22.-) (3C-like protease)
           (3C-pro); RNA-directed RNA polymerase (EC 2.7.7.48)];
           n=135; root|Rep: Non-structural polyprotein [Contains:
           Unknown protein; Helicase (2C- like protein) (P2C);
           3A-like protein; Viral genome-linked protein (VPg);
           Thiol protease P3C (EC 3.4.22.-) (3C-like protease)
           (3C-pro); RNA-directed RNA polymerase (EC 2.7.7.48)] -
           San Miguel sea lion virus serotype 1 (SMSV-1) (SMSV
           serotype 1)
          Length = 1879

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 128 WVVQSPPADRAVRLSREPLEPGPPIQRESTGNAYRRPL 15
           W+V+  P D   R  R+P+   P  +R  T N Y R L
Sbjct: 32  WMVRCGPLDHDSRHGRDPVRASPQAKRVRTPNPYPRHL 69


>UniRef50_Q9USK0 Cluster: Inositol-pentakisphosphate 2-kinase (EC
           2.7.1.158) (Inositol- 1,3,4,5,6-pentakisphosphate
           2-kinase) (Ins(1,3,4,5,6)P5 2-kinase); n=1;
           Schizosaccharomyces pombe|Rep:
           Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158)
           (Inositol- 1,3,4,5,6-pentakisphosphate 2-kinase)
           (Ins(1,3,4,5,6)P5 2-kinase) - Schizosaccharomyces pombe
           (Fission yeast)
          Length = 640

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -2

Query: 254 RPIYRELAQVLQQNNSNRCCRLHRSQCPSRRGMKSGIEYHQLWVVQSPPA 105
           +P+ R+   +  QN S     L+   C   + +K GIE    W+ QSP A
Sbjct: 455 QPVTRDFL-LAAQNASGIYLNLNEQYCLVMKDLKDGIEMKPKWLTQSPAA 503


>UniRef50_A6FNM3 Cluster: Putative uncharacterized protein; n=1;
           Roseobacter sp. AzwK-3b|Rep: Putative uncharacterized
           protein - Roseobacter sp. AzwK-3b
          Length = 500

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -2

Query: 119 QSPPADRAVRLSREPLEPGPPIQRESTG 36
           ++PP++ A+ +S EP +P PP   +++G
Sbjct: 135 EAPPSEGALSISTEPAQPAPPEIEDNSG 162


>UniRef50_Q5Z770 Cluster: Putative uncharacterized protein
           P0421H01.28; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0421H01.28 - Oryza sativa subsp. japonica (Rice)
          Length = 157

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
 Frame = -2

Query: 272 SGRARTRPIYRELAQVLQQNNSNRCCRLHRSQCPSRRGMKSGIEYHQLWVVQSPP--ADR 99
           SGR R RP     A     ++S++      S   S++     +      +  +PP  A  
Sbjct: 63  SGRERQRPGCSTAAASAPSSSSHKTSTPWSSCMSSKKSPSKKLTKSPGALDGNPPRLAPT 122

Query: 98  AVRLSREPLEPGPP--IQRESTGNAYRRPLVAP 6
            +RL+  PL P PP   +R S    +RR +  P
Sbjct: 123 RIRLASPPLPPAPPPGRRRRSASRPHRRAVALP 155


>UniRef50_Q9VHP9 Cluster: CG31258-PA; n=2; Drosophila
           melanogaster|Rep: CG31258-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 1399

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = -2

Query: 182 SQCPSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRESTGNAYRRPLVA 9
           S  P     K  +  +   V    PA++ + LS+EP EP  P+Q + T  A R P++A
Sbjct: 175 SSTPCTEKQKEEVAKNTTRVETDKPAEKPMELSQEP-EPENPLQTKVTSPA-RNPILA 230


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,761,812
Number of Sequences: 1657284
Number of extensions: 4315915
Number of successful extensions: 13022
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13015
length of database: 575,637,011
effective HSP length: 77
effective length of database: 448,026,143
effective search space used: 10304601289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)