Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D05
         (373 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   2.7  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   4.7  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   4.7  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   6.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   8.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   8.2  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +1

Query: 238 DIVSKAKQSRGEKKARKIMSKLGLKLVQGVNRVTIRKSKNI 360
           D++   +Q+R +   R+ M KL   + +    V+  + KN+
Sbjct: 421 DVILVGEQARAQDGLRRRMDKLKSSIEEANLAVSAEREKNV 461


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 7   GLVVHRILIFIKGIITLSQKIQTCLELTE 93
           G   H  +IF++G++T S  +    E  E
Sbjct: 689 GQFEHPNVIFLQGVVTKSNPVMIITEFME 717



 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 332 LFTPCTSLRPSLLMILRAFFSPRDC 258
           L+TP     P+  M +   F+ RDC
Sbjct: 73  LWTPFIERGPANRMYIEIKFTTRDC 97


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 193 GAPGAGGISNPIAGIDI 243
           G+PG+GGI +   G+ I
Sbjct: 286 GSPGSGGIRSDQMGVKI 302


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
          preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 9  PGCPPNSNFYK 41
          P CPP S F K
Sbjct: 59 PRCPPGSKFIK 69


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 9  PGCPPNSNFYK 41
          P CPP S F K
Sbjct: 59 PRCPPGSKFIK 69


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 268 GEKKARKIMSKLGLK 312
           GEKK RK+++K  L+
Sbjct: 98  GEKKFRKVITKAPLE 112


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +1

Query: 55  LSQKIQTCLELTELDKATASMTEKRKEETA 144
           L+  +QT + +TE+  A+ + ++   E+ A
Sbjct: 812 LTAAVQTSVGVTEISLASNASSKTNNEQVA 841


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +1

Query: 55  LSQKIQTCLELTELDKATASMTEKRKEETA 144
           L+  +QT + +TE+  A+ + ++   E+ A
Sbjct: 902 LTAAVQTSVGVTEISLASNASSKTNNEQVA 931


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,568
Number of Sequences: 438
Number of extensions: 1807
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)