Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_D03
         (242 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   0.71 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   3.8  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    20   3.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   3.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    19   6.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   8.8  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 0.71
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 128 LLCLVTDILKLLKK 169
           L C++ ++LKL+KK
Sbjct: 119 LTCMIQEVLKLMKK 132


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 83  YYFS*LISSRHRLCILLCLVTDIL 154
           Y+ + +   RHRLC+ +  V  I+
Sbjct: 165 YFTAHVTHPRHRLCVFVAGVVFIV 188


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 49  CRNSARGFVI*VLFFLAY 102
           CRN     V  VLF+L Y
Sbjct: 35  CRNCIHPTVFSVLFWLGY 52


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 49  CRNSARGFVI*VLFFLAY 102
           CRN     V  VLF+L Y
Sbjct: 483 CRNCIHPTVFSVLFWLGY 500


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 81  SIIFLSLLAADIVYVFYY 134
           S +FLSLL   ++  F Y
Sbjct: 12  SSVFLSLLIPALILYFIY 29


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 165 KKTDYSRF 188
           KKTDYS F
Sbjct: 342 KKTDYSSF 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,779
Number of Sequences: 438
Number of extensions: 1115
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4149981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)