Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C22
         (286 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   0.32 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   0.32 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   0.97 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    20   6.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 0.32
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 103 IQYMCGKRFPRRNMFEKIRYF 41
           I Y  G  FP+RN F  + Y+
Sbjct: 301 IMYSNGVTFPQRNRFSSLPYY 321


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 0.32
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 103 IQYMCGKRFPRRNMFEKIRYF 41
           I Y  G  FP+RN F  + Y+
Sbjct: 301 IMYSNGVTFPQRNRFSSLPYY 321


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 14  GNKLPSNLAEIPDFLK 61
           G+KLP N+  IPD ++
Sbjct: 67  GHKLPPNIIAIPDVVE 82


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 255 LLNQNLESLSNIHWY 211
           +LN +L+S SN++ Y
Sbjct: 31  MLNSHLKSHSNVYQY 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,661
Number of Sequences: 438
Number of extensions: 1068
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)