Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C21
         (365 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   3.6  
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    23   3.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   4.7  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    22   8.3  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 171 KVHMHEDPIGFTLEFHFAANDYFTNNILTKEY 266
           ++  H DP+G +    F    YFT  I    Y
Sbjct: 21  RIQGHSDPLGHSTPGSFDPQGYFTPPIANVGY 52


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 63  HSDPSGAQQTCCLHRVCFSSC 1
           H    G +   CLHR  FS+C
Sbjct: 130 HCPLIGMEVENCLHRTTFSNC 150


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = -1

Query: 206 REANRILVHVDFNILQAFKDRLIMFLHHLAQH*NVSKYIVPEVGDSLDIRI 54
           R ANR    V  ++  AF       +    Q  N+ KY+   +G+    R+
Sbjct: 542 RGANRFCAVVTLDVKNAFNSASWTAIARSLQRINIPKYLYDIIGNYFRNRV 592


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 12/51 (23%), Positives = 21/51 (41%)
 Frame = -1

Query: 206 REANRILVHVDFNILQAFKDRLIMFLHHLAQH*NVSKYIVPEVGDSLDIRI 54
           R + R    V  ++  AF     + + +  Q  N  KY+   +GD    R+
Sbjct: 537 RYSGRYCAVVTLDVTNAFNSASWLAIANALQRINTPKYLYDIIGDYFRNRV 587


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,959
Number of Sequences: 2352
Number of extensions: 8005
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27514560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)