Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_C21
(365 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome ass... 122 1e-28
BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p pro... 122 1e-28
AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA... 122 1e-28
AY113255-1|AAM29260.1| 283|Drosophila melanogaster AT14585p pro... 110 6e-25
AE014297-4190|AAF56755.2| 283|Drosophila melanogaster CG5017-PA... 110 6e-25
AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p pro... 97 8e-21
AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.1... 97 8e-21
AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA ... 97 8e-21
U30470-1|AAA74264.1| 268|Drosophila melanogaster SET protein. 61 4e-10
AY118922-1|AAM50782.1| 269|Drosophila melanogaster LD23703p pro... 61 4e-10
AM294390-1|CAL26320.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294389-1|CAL26319.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294388-1|CAL26318.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294387-1|CAL26317.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294386-1|CAL26316.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294385-1|CAL26315.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294384-1|CAL26314.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294383-1|CAL26313.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294382-1|CAL26312.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AM294381-1|CAL26311.1| 269|Drosophila melanogaster CG4299 protein. 61 4e-10
AE014297-1979|AAF55155.1| 269|Drosophila melanogaster CG4299-PA... 61 4e-10
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 29 2.5
M11798-1|AAA28863.1| 471|Drosophila melanogaster protein ( Dros... 29 2.5
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 29 2.5
AY129297-1|AAM97765.1| 802|Drosophila melanogaster anaphase-pro... 27 7.5
AY058717-1|AAL13946.1| 449|Drosophila melanogaster LD45730p pro... 27 7.5
AE013599-3760|AAF47123.1| 802|Drosophila melanogaster CG3060-PA... 27 7.5
AE014296-1291|AAS65059.1| 1577|Drosophila melanogaster CG7526-PB... 27 10.0
AE014296-1290|AAF50538.3| 1577|Drosophila melanogaster CG7526-PA... 27 10.0
>U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome
assembly protein NAP-1 protein.
Length = 370
Score = 122 bits (295), Expect = 1e-28
Identities = 50/100 (50%), Positives = 71/100 (71%)
Frame = +3
Query: 60 NVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHEDPIGFTLEFHFAANDYF 239
+ KGIP FW +FRN +++ EM+Q HDEP ++ L DI + +++ +TLEFHF N+YF
Sbjct: 142 DAKGIPGFWLTVFRNTAIMSEMVQPHDEPAIRKLIDISIK-YDNGHSYTLEFHFDKNEYF 200
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKK 359
+N++LTK+Y +K D +P FEGPEIY C GC INW+K
Sbjct: 201 SNSVLTKQYVLKSTVDPNDPFAFEGPEIYKCTGCTINWEK 240
>BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p
protein.
Length = 370
Score = 122 bits (295), Expect = 1e-28
Identities = 50/100 (50%), Positives = 71/100 (71%)
Frame = +3
Query: 60 NVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHEDPIGFTLEFHFAANDYF 239
+ KGIP FW +FRN +++ EM+Q HDEP ++ L DI + +++ +TLEFHF N+YF
Sbjct: 142 DAKGIPGFWLTVFRNTAIMSEMVQPHDEPAIRKLIDISIK-YDNGHSYTLEFHFDKNEYF 200
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKK 359
+N++LTK+Y +K D +P FEGPEIY C GC INW+K
Sbjct: 201 SNSVLTKQYVLKSTVDPNDPFAFEGPEIYKCTGCTINWEK 240
>AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA
protein.
Length = 370
Score = 122 bits (295), Expect = 1e-28
Identities = 50/100 (50%), Positives = 71/100 (71%)
Frame = +3
Query: 60 NVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHEDPIGFTLEFHFAANDYF 239
+ KGIP FW +FRN +++ EM+Q HDEP ++ L DI + +++ +TLEFHF N+YF
Sbjct: 142 DAKGIPGFWLTVFRNTAIMSEMVQPHDEPAIRKLIDISIK-YDNGHSYTLEFHFDKNEYF 200
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKK 359
+N++LTK+Y +K D +P FEGPEIY C GC INW+K
Sbjct: 201 SNSVLTKQYVLKSTVDPNDPFAFEGPEIYKCTGCTINWEK 240
>AY113255-1|AAM29260.1| 283|Drosophila melanogaster AT14585p
protein.
Length = 283
Score = 110 bits (264), Expect = 6e-25
Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Frame = +3
Query: 6 RKNKPGEDNKSAEPRMDPNVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMH 185
RK E K ++ N + +P+FW + + + E + + DE IL+CL DI+ ++
Sbjct: 73 RKKILDEFRKQNHGDVETN-QSVPNFWLRVLK--ASYTEFISKRDEKILECLSDIRSRLY 129
Query: 186 EDPI-GFTLEFHFAANDYFTNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKG 362
+P+ F +EFHF NDYFTN +LTK Y + C PD ++PL ++G EIY C+GC I+WK+
Sbjct: 130 NEPVVKFDIEFHFDPNDYFTNTVLTKTYFLNCLPDPDDPLAYDGAEIYKCEGCVIDWKQT 189
Query: 363 K 365
K
Sbjct: 190 K 190
>AE014297-4190|AAF56755.2| 283|Drosophila melanogaster CG5017-PA
protein.
Length = 283
Score = 110 bits (264), Expect = 6e-25
Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Frame = +3
Query: 6 RKNKPGEDNKSAEPRMDPNVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMH 185
RK E K ++ N + +P+FW + + + E + + DE IL+CL DI+ ++
Sbjct: 73 RKKILDEFRKQNHGDVETN-QSVPNFWLRVLK--ASYTEFISKRDEKILECLSDIRSRLY 129
Query: 186 EDPI-GFTLEFHFAANDYFTNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKG 362
+P+ F +EFHF NDYFTN +LTK Y + C PD ++PL ++G EIY C+GC I+WK+
Sbjct: 130 NEPVVKFDIEFHFDPNDYFTNTVLTKTYFLNCLPDPDDPLAYDGAEIYKCEGCVIDWKQT 189
Query: 363 K 365
K
Sbjct: 190 K 190
>AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p
protein.
Length = 375
Score = 96.7 bits (230), Expect = 8e-21
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Frame = +3
Query: 51 MDPNVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHEDPIGFTLEFHFAAN 230
+ P G+P FW +F+NV +L E++Q+HDEP+L+ L D+++ +D + + F F N
Sbjct: 171 VSPTTLGVPRFWLTVFQNVPLLSELVQDHDEPLLESLMDVRLAYDQD--SYMVIFQFRPN 228
Query: 231 DYFTNN--ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKG 362
+ ++ +LTK Y ++ D E P FEGPEI C+GC I+W+ G
Sbjct: 229 SFLHDSSLLLTKRYFLQHSADPEYPFLFEGPEIVRCEGCHIHWRDG 274
>AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.18
protein.
Length = 375
Score = 96.7 bits (230), Expect = 8e-21
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Frame = +3
Query: 51 MDPNVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHEDPIGFTLEFHFAAN 230
+ P G+P FW +F+NV +L E++Q+HDEP+L+ L D+++ +D + + F F N
Sbjct: 171 VSPTTLGVPRFWLTVFQNVPLLSELVQDHDEPLLESLMDVRLAYDQD--SYMVIFQFRPN 228
Query: 231 DYFTNN--ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKG 362
+ ++ +LTK Y ++ D E P FEGPEI C+GC I+W+ G
Sbjct: 229 SFLHDSSLLLTKRYFLQHSADPEYPFLFEGPEIVRCEGCHIHWRDG 274
>AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA
protein.
Length = 375
Score = 96.7 bits (230), Expect = 8e-21
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Frame = +3
Query: 51 MDPNVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHEDPIGFTLEFHFAAN 230
+ P G+P FW +F+NV +L E++Q+HDEP+L+ L D+++ +D + + F F N
Sbjct: 171 VSPTTLGVPRFWLTVFQNVPLLSELVQDHDEPLLESLMDVRLAYDQD--SYMVIFQFRPN 228
Query: 231 DYFTNN--ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKG 362
+ ++ +LTK Y ++ D E P FEGPEI C+GC I+W+ G
Sbjct: 229 SFLHDSSLLLTKRYFLQHSADPEYPFLFEGPEIVRCEGCHIHWRDG 274
>U30470-1|AAA74264.1| 268|Drosophila melanogaster SET protein.
Length = 268
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 75 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 134
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 135 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 170
>AY118922-1|AAM50782.1| 269|Drosophila melanogaster LD23703p
protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294390-1|CAL26320.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294389-1|CAL26319.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294388-1|CAL26318.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294387-1|CAL26317.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294386-1|CAL26316.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294385-1|CAL26315.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294384-1|CAL26314.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294383-1|CAL26313.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294382-1|CAL26312.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AM294381-1|CAL26311.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>AE014297-1979|AAF55155.1| 269|Drosophila melanogaster CG4299-PA
protein.
Length = 269
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 63 VKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYF 239
VK IP+FW F N + ++ E +E L L ++V ED G+ + FHF N YF
Sbjct: 76 VKRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYF 135
Query: 240 TNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
N +LTKE+ + EN + P + I WK+GK
Sbjct: 136 ENKVLTKEFHLNSAAASENG---DWP---ASTSTPIKWKEGK 171
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 101 SKYIVPEVGDSLDIRIHPGLSRLVVFTGFVFPR 3
+KYIV + G+ +D+R HP S L + G+ R
Sbjct: 408 AKYIVRDNGERIDLRFHPKSSDLHLQCGYKVER 440
>M11798-1|AAA28863.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterRNA polymerase II large subunit
gene, 5' end. ).
Length = 471
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 101 SKYIVPEVGDSLDIRIHPGLSRLVVFTGFVFPR 3
+KYIV + G+ +D+R HP S L + G+ R
Sbjct: 407 AKYIVRDNGERIDLRFHPKSSDLHLQCGYKVER 439
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 101 SKYIVPEVGDSLDIRIHPGLSRLVVFTGFVFPR 3
+KYIV + G+ +D+R HP S L + G+ R
Sbjct: 408 AKYIVRDNGERIDLRFHPKSSDLHLQCGYKVER 440
>AY129297-1|AAM97765.1| 802|Drosophila melanogaster
anaphase-promoting complex subunit2 protein.
Length = 802
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -1
Query: 95 YIVPEVGDSLDIRI-HPGLSRLVVFTGFV 12
Y+ + +SL+ RI HPG++ + + TG+V
Sbjct: 357 YLTESLRNSLEARILHPGVNTMDILTGYV 385
>AY058717-1|AAL13946.1| 449|Drosophila melanogaster LD45730p
protein.
Length = 449
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -1
Query: 95 YIVPEVGDSLDIRI-HPGLSRLVVFTGFV 12
Y+ + +SL+ RI HPG++ + + TG+V
Sbjct: 4 YLTESLRNSLEARILHPGVNTMDILTGYV 32
>AE013599-3760|AAF47123.1| 802|Drosophila melanogaster CG3060-PA
protein.
Length = 802
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -1
Query: 95 YIVPEVGDSLDIRI-HPGLSRLVVFTGFV 12
Y+ + +SL+ RI HPG++ + + TG+V
Sbjct: 357 YLTESLRNSLEARILHPGVNTMDILTGYV 385
>AE014296-1291|AAS65059.1| 1577|Drosophila melanogaster CG7526-PB,
isoform B protein.
Length = 1577
Score = 26.6 bits (56), Expect = 10.0
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 YNIFRNVS-MLCEMMQEHDEPILKCLQDIKVHMHEDPIGFTLEFH---FAANDYFTNNIL 254
Y+ +S M C + DE I C+ + H++ +G+ LE + NDY N+ +
Sbjct: 90 YDFENGISEMFCSNQKWVDE-IPTCIPQLNFEEHDEKVGYDLEDYSDETVPNDYVENSDI 148
Query: 255 TKEYSMKCKPDDENPLEFEGP 317
++ DDE E E P
Sbjct: 149 DED-------DDEEVSEREPP 162
>AE014296-1290|AAF50538.3| 1577|Drosophila melanogaster CG7526-PA,
isoform A protein.
Length = 1577
Score = 26.6 bits (56), Expect = 10.0
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 YNIFRNVS-MLCEMMQEHDEPILKCLQDIKVHMHEDPIGFTLEFH---FAANDYFTNNIL 254
Y+ +S M C + DE I C+ + H++ +G+ LE + NDY N+ +
Sbjct: 90 YDFENGISEMFCSNQKWVDE-IPTCIPQLNFEEHDEKVGYDLEDYSDETVPNDYVENSDI 148
Query: 255 TKEYSMKCKPDDENPLEFEGP 317
++ DDE E E P
Sbjct: 149 DED-------DDEEVSEREPP 162
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,621,066
Number of Sequences: 53049
Number of extensions: 331891
Number of successful extensions: 838
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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