Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C21
         (365 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    27   0.052
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    27   0.052
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   4.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   4.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   4.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.6  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 27.5 bits (58), Expect = 0.052
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 231 DYFTNN---ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
           D+F  N   IL +EY     P  E+ +E    E+ S +GC++ W+ GK
Sbjct: 90  DFFVKNARMILLEEYI----PRVESVVETCKKEVTSTEGCEVAWQFGK 133


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 27.5 bits (58), Expect = 0.052
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 231 DYFTNN---ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINWKKGK 365
           D+F  N   IL +EY     P  E+ +E    E+ S +GC++ W+ GK
Sbjct: 64  DFFVKNARMILLEEYI----PRVESVVETCKKEVTSTEGCEVAWQFGK 107


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 101 SKYIVPEVGDSLDIRIHPGLSRL 33
           S Y++ E G  +DI    GL+ L
Sbjct: 342 SGYLIDEYGKKIDIYTPEGLNML 364


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 101 SKYIVPEVGDSLDIRIHPGLSRL 33
           S Y++ E G  +DI    GL+ L
Sbjct: 342 SGYLIDEYGKKIDIYTPEGLNML 364


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 164 LQAFKDRLIMFLHHL 120
           LQ  +DRL   +HHL
Sbjct: 330 LQKERDRLTAMMHHL 344


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 82  KSGIPLTFGSIRGSADLLSSPGL 14
           K+G P +    +G A   SSPGL
Sbjct: 898 KNGEPTSAAFAQGFATAASSPGL 920


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,028
Number of Sequences: 438
Number of extensions: 2091
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)