Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C20
         (321 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   1.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   1.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   1.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   2.1  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    20   6.4  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 246 TVNHTQLHRFCKNHFFICYKS 308
           T +HT+L   C + F+ C K+
Sbjct: 81  TASHTRLSCDCDDKFYDCLKN 101


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 246 TVNHTQLHRFCKNHFFICYKS 308
           T +HT+L   C + F+ C K+
Sbjct: 86  TASHTRLSCDCDDKFYDCLKN 106


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 246 TVNHTQLHRFCKNHFFICYKS 308
           T +HT+L   C + F+ C K+
Sbjct: 86  TASHTRLSCDCDDKFYDCLKN 106


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 310 YDL*HIKKWFLQNLCNCV 257
           Y+L  I KWFL  + N +
Sbjct: 271 YELTKIDKWFLHKMKNII 288


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 91  CRQIMQIYNNVNIIKLYHLKINIFMQ 14
           C      YNN N  KLY+  IN   Q
Sbjct: 311 CNYSNNYYNNNNYKKLYY-NINYIEQ 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,373
Number of Sequences: 438
Number of extensions: 1414
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)