Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_C19
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 30 0.63
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 30 0.63
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 1.1
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 1.1
Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical p... 29 1.5
Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 28 2.5
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 28 2.5
AF125955-6|AAD14714.1| 168|Caenorhabditis elegans Hypothetical ... 28 2.5
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p... 27 5.9
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ... 27 5.9
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ... 27 5.9
Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81094-2|CAB03156.1| 770|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 7.8
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 30.3 bits (65), Expect = 0.63
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 219 RATPYQEPIEYITTDNMSINGYQDLMQGPLQTYLALSKQIGGDV-VTHSNLVNAAFQAQL 395
RAT Y +E I + + Y DL + L+T + +I G++ + H ++ +AQ+
Sbjct: 513 RATKYSLLLETILKNEQPFSEYHDLTKTALETARKFAHKIDGNLSMAHMSMKWEELKAQI 572
Query: 396 RYSSAS 413
SSA+
Sbjct: 573 DSSSAT 578
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 30.3 bits (65), Expect = 0.63
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 219 RATPYQEPIEYITTDNMSINGYQDLMQGPLQTYLALSKQIGGDV-VTHSNLVNAAFQAQL 395
RAT Y +E I + + Y DL + L+T + +I G++ + H ++ +AQ+
Sbjct: 513 RATKYSLLLETILKNEQPFSEYHDLTKTALETARKFAHKIDGNLSMAHMSMKWEELKAQI 572
Query: 396 RYSSAS 413
SSA+
Sbjct: 573 DSSSAT 578
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 273 INGYQDLMQGPLQTYLALSKQIGGDVVTHSNLVNAAFQAQLRY 401
+ Y D ++ PL + L+ Q+GGD+ V A F + Y
Sbjct: 817 VRAYDDAIEEPLANWSKLTDQLGGDLAAVKPKVLAMFASMRNY 859
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 273 INGYQDLMQGPLQTYLALSKQIGGDVVTHSNLVNAAFQAQLRY 401
+ Y D ++ PL + L+ Q+GGD+ V A F + Y
Sbjct: 56 VRAYDDAIEEPLANWSKLTDQLGGDLAAVKPKVLAMFASMRNY 98
>Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical
protein C34C6.6b protein.
Length = 500
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 212 SWRQVQANTATSESAHARAVAAPIETSLFQDVRPTS 105
+WRQVQA + TS S+H A + +S + D TS
Sbjct: 114 AWRQVQAPSMTSTSSHQPITDAGMWSSEYLDTVDTS 149
>Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical
protein C34C6.6a protein.
Length = 502
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 212 SWRQVQANTATSESAHARAVAAPIETSLFQDVRPTS 105
+WRQVQA + TS S+H A + +S + D TS
Sbjct: 116 AWRQVQAPSMTSTSSHQPITDAGMWSSEYLDTVDTS 151
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 210 ASARATPYQEPIEYITTDNMSINGYQDLMQGPLQTYLALSK 332
A A P Q P +Y+T N YQ G + TY SK
Sbjct: 516 APAPMQPQQPPKQYVTQPPTYKNNYQTAALGQVNTYSGQSK 556
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 41 GADAGNEVDFTAALHNPASDLETLVERLEKVTSRLEQLPLLRAHSQTSPCS 193
G++ D + A + DLE+L E E + LEQL +++ + PCS
Sbjct: 50 GSEKNASDDDSDASSVMSDDLESLGETTEVLNFSLEQLSMMKKNLAQFPCS 100
>AF125955-6|AAD14714.1| 168|Caenorhabditis elegans Hypothetical
protein F46E10.3 protein.
Length = 168
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +1
Query: 334 KSEVMWSRIPTWST--QLSRLNFATVQL 411
KSEV+ R P W+T QL + NF T+ L
Sbjct: 57 KSEVIIFRFPQWTTLNQLLKFNFTTIVL 84
>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 92 ASDLETLVERLEKVTSRLEQLPLLRAHSQTSPCSPALVASFSPSNPIS 235
AS L + + + + +P++ A S S P LVASFS N +S
Sbjct: 994 ASTLPLIYFLVFNIQNTKSVIPIILAISSLSVTFPNLVASFSAENQVS 1041
>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 92 ASDLETLVERLEKVTSRLEQLPLLRAHSQTSPCSPALVASFSPSNPIS 235
AS L + + + + +P++ A S S P LVASFS N +S
Sbjct: 994 ASTLPLIYFLVFNIQNTKSVIPIILAISSLSVTFPNLVASFSAENQVS 1041
>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 92 ASDLETLVERLEKVTSRLEQLPLLRAHSQTSPCSPALVASFSPSNPIS 235
AS L + + + + +P++ A S S P LVASFS N +S
Sbjct: 994 ASTLPLIYFLVFNIQNTKSVIPIILAISSLSVTFPNLVASFSAENQVS 1041
>Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 171 CARKS--GSCSNRDVTFSRRSTNVSRSDAGL 85
C R+S G+C DVTF RS + S +D +
Sbjct: 517 CFRRSSNGTCIQHDVTFMIRSRHFSHNDLSM 547
>Z81094-2|CAB03156.1| 770|Caenorhabditis elegans Hypothetical
protein F58G11.1b protein.
Length = 770
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 35 PVGADAGNEVD--FTAALHNPASDLETLVERLEKVTSRLEQLPLLRAHSQTS 184
P ADA N+ +TA+ PA + VE+ ++VTS L+Q + S T+
Sbjct: 710 PSSADAFNQPQGVYTASKQVPARSEQEGVEQKQQVTSTLQQNSSKTSSSSTT 761
>Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 171 CARKS--GSCSNRDVTFSRRSTNVSRSDAGL 85
C R+S G+C DVTF RS + S +D +
Sbjct: 517 CFRRSSNGTCIQHDVTFMIRSRHFSHNDLSM 547
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,703,554
Number of Sequences: 27780
Number of extensions: 191747
Number of successful extensions: 633
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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