Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_C16
(473 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 111 7e-26
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 43 2e-05
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 39 4e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 37 0.001
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 37 0.001
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 37 0.001
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.002
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 36 0.003
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 36 0.003
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 35 0.006
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 34 0.013
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 33 0.022
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.022
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 31 0.12
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 30 0.16
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 30 0.21
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 27 1.1
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 1.5
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 27 1.9
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 2.5
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 26 3.4
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 26 3.4
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 4.5
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 25 5.9
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.8
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 25 7.8
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 111 bits (266), Expect = 7e-26
Identities = 57/126 (45%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Frame = +2
Query: 104 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV--GKGDGQREFTGLGNCISKIFKSD 277
++F SL FVY LD+ARTRLA D K G+R+F GL + K ++SD
Sbjct: 130 KWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSD 189
Query: 278 GLTGLYRGFGVSVQGIIIYRAAYFGFYDTARG-MLPDPKNTPIVISWAIAQTVTTVAGII 454
GL GLYRGFG SV GI++YR YFG YDT + +L P + S+ + VTT +G+
Sbjct: 190 GLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVA 249
Query: 455 SYPFDT 472
SYP DT
Sbjct: 250 SYPLDT 255
Score = 43.6 bits (98), Expect = 2e-05
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +1
Query: 10 RYFPTQALNFAFKDKYKQVFXW 75
RYFPTQALNFAFKDK+K++F +
Sbjct: 100 RYFPTQALNFAFKDKFKKMFGY 121
Score = 28.3 bits (60), Expect = 0.63
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +2
Query: 233 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIVIS 412
+ G+G C + +G+ L+RG +V +A F F D + M K
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAK 130
Query: 413 W 415
W
Sbjct: 131 W 131
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 43.2 bits (97), Expect = 2e-05
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 149 TSLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 328
T V P + + RL DV ++ G +C +KI K + + LY GF ++ +
Sbjct: 117 TETFVVVPFELMKIRLQ-DVKNAS---KYNGTVDCFTKIVKQERILALYNGFEATMWRHV 172
Query: 329 IYRAAYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAG-IISYPFD 469
++ A YFG R L P + + IA T+ + G +S PFD
Sbjct: 173 VWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFD 221
Score = 42.3 bits (95), Expect = 4e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +2
Query: 164 VYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAA 343
+YPLD +TR+ VGK D + G +C+ KI K++G LYRG + RA
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRAL 81
Query: 344 YFGFYDT 364
F DT
Sbjct: 82 KFASNDT 88
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 38.7 bits (86), Expect = 4e-04
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 161 FVYPLDFARTRL-AADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYR 337
F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG V + G+ Y
Sbjct: 245 FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILGMFPYS 302
Query: 338 AAYFGFYD 361
A G ++
Sbjct: 303 ATDLGTFE 310
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 37.1 bits (82), Expect = 0.001
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +2
Query: 167 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 346
YP + RTRL +G ++TGL C ++ G+ GLY G + ++
Sbjct: 291 YPHEVVRTRLRQSPSI-NGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACIL 349
Query: 347 FGFYD 361
FG Y+
Sbjct: 350 FGSYE 354
Score = 33.9 bits (74), Expect = 0.013
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 170 PLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGI 325
P+ +TRL D G + + + +CI K + +G GLY+G S+ G+
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGV 232
Score = 25.8 bits (54), Expect = 3.4
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +2
Query: 275 DGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD-----PKNTPI-VISWAIAQTVT 436
+G L+RG G ++ G I R+ F Y + +L D +N+ I +++ AIA +T
Sbjct: 117 EGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENSQIHLMAAAIAGVIT 176
Query: 437 TVA 445
+ A
Sbjct: 177 SAA 179
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 37.1 bits (82), Expect = 0.001
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +2
Query: 164 VYPLDFARTRLAAD-----VGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGII 328
V PLD +TR A G G G + + IF ++G+ GLYRG G + G +
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 329 IYRAAYFGFYDTAR 370
+ YF Y+ +
Sbjct: 83 PSWSIYFVVYEKCK 96
Score = 29.1 bits (62), Expect = 0.36
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 260 KIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT 439
KI+K +GL YRG S+ G ++ F Y+ + L D +A T++
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDDFFGKKSNFHIVLAATLSK 297
Query: 440 V-AGIISYPFD 469
+ A ++YP +
Sbjct: 298 IAASTVTYPHE 308
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 37.1 bits (82), Expect = 0.001
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 248 NCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIVISWAIAQ 427
N IS + +S+GL G YRG+ + V + +++ Y+ ++ L N I + I
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICS 180
Query: 428 TV-TTVAGIISYPFD 469
+ T VA IS P D
Sbjct: 181 ALGTVVATTISTPLD 195
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.002
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 8/107 (7%)
Frame = +2
Query: 170 PLDFARTR--LAADVGKGD-GQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRA 340
P + +TR L + K D +R + +G S I + +G+ GL RG G + I
Sbjct: 43 PFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNG 102
Query: 341 AYFGFYDTAR-----GMLPDPKNTPIVISWAIAQTVTTVAGIISYPF 466
GFY+ R L DPK + I+ A + PF
Sbjct: 103 CRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSPF 149
Score = 28.3 bits (60), Expect = 0.63
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 248 NCISKIFKSDGLTGLYRGFGVSVQGI 325
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.9 bits (79), Expect = 0.003
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 167 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 346
+P D R R + G G + + + I I+K++G+ G +RG+ ++ II +
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSIT 303
Query: 347 FGFYDTARGMLPD 385
+ Y+T ML D
Sbjct: 304 WYTYETVSKMLHD 316
Score = 31.5 bits (68), Expect = 0.068
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 227 REFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD 361
+E+T L + + KI+ +GL G +RG G + Y A F ++
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFN 98
Score = 25.0 bits (52), Expect = 5.9
Identities = 25/77 (32%), Positives = 32/77 (41%)
Frame = +2
Query: 152 SLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIII 331
S YPLD ARTRL+ + G R + N + K LT L+ VQ
Sbjct: 129 SCATTYPLDIARTRLSIETA-GLTSRSL-AINNVANNSLKVKPLT-LWSTLLYIVQHEGG 185
Query: 332 YRAAYFGFYDTARGMLP 382
Y A Y G T ++P
Sbjct: 186 YPALYNGLPATLLNVVP 202
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 35.9 bits (79), Expect = 0.003
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 158 CFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYR 337
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG V G+ Y+
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG-AVPRMGLGAYQ 276
Query: 338 AAYFGFY-DTARGML 379
F D RG L
Sbjct: 277 TFVMVFLADCVRGYL 291
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 35.1 bits (77), Expect = 0.006
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +2
Query: 164 VYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAA 343
+YP+D +TR+ + G + + N + KI ++G+ L+RG + G A
Sbjct: 37 MYPVDAIKTRM--QMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHAI 94
Query: 344 YFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFD 469
YF + + + + P+ + A A + T++ PFD
Sbjct: 95 YFSVLEFFKSKINASPDRPLASALAGACAI-TISDAFMTPFD 135
Score = 29.9 bits (64), Expect = 0.21
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 227 REFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLP-----DPK 391
R++ +C + +F+++GL Y + + I + A YDT L DP
Sbjct: 146 RKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFLNPNAVYDPT 205
Query: 392 NTPIV--ISWAIAQTVTTVAGII 454
+ I +S AIA ++TT ++
Sbjct: 206 SHIISGGLSGAIASSLTTPLDVV 228
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 33.9 bits (74), Expect = 0.013
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 233 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTAR 370
+T + + I I+K +G++G +RGFGV+ + Y FY+ ++
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSK 186
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.1 bits (72), Expect = 0.022
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 239 GLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD 361
G+ + + ++KS+GL GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
Score = 29.1 bits (62), Expect = 0.36
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 164 VYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLT-GLYRGFGVSVQGIIIYRA 340
++ LD +TR A + ++ G+ C S I +G+ GLY G + G + A
Sbjct: 33 MHSLDTVKTRQQAALYTN----KYNGMVKCYSTILCEEGVFHGLYSGVCPMLIGSLPATA 88
Query: 341 AYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISY 460
+F Y+ + L N P + + +A V + + Y
Sbjct: 89 LFFSSYEYTKRHLMSNYNLPETLCFLLAGFVGDLFASVVY 128
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.1 bits (72), Expect = 0.022
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 233 FTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTAR 370
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 30.7 bits (66), Expect = 0.12
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 152 SLCFVYPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIII 331
S ++PLD A+ ++ A + + D + F S I + + LY G ++V G
Sbjct: 14 STLIMHPLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLSINVLGSAA 69
Query: 332 YRAAYFGFYDTAR 370
AYF YD ++
Sbjct: 70 SWGAYFCIYDFSK 82
Score = 25.0 bits (52), Expect = 5.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 263 IFKSDGLTGLYRGFGVSVQGI 325
+ K++GL G Y GF S+ G+
Sbjct: 143 LIKNEGLRGCYAGFAPSLLGV 163
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 30.3 bits (65), Expect = 0.16
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 239 GLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDP 388
G G ++I+K G +GL+ G GV + I A + YD+ + M P
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKIMCGFP 307
Score = 25.0 bits (52), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 263 IFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYD 361
I +GL GLY G ++ G + +GFY+
Sbjct: 68 ILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYE 100
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 29.9 bits (64), Expect = 0.21
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Frame = +2
Query: 152 SLCFVYPLDFARTRLA--ADVGKGDGQREFT-GLGN-----CISK---IFKSDGLTGLYR 298
S+ F YPL+ R RLA + GK + T + + C K + + + YR
Sbjct: 130 SVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFLCNKKYPGLSRLSKICNFYR 189
Query: 299 GFGVSVQGIIIYRAAYFGFYDTA 367
GF V++ GI Y F YD A
Sbjct: 190 GFSVTLTGIFPYAGMSFLAYDLA 212
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.5 bits (58), Expect = 1.1
Identities = 17/66 (25%), Positives = 26/66 (39%)
Frame = +2
Query: 167 YPLDFARTRLAADVGKGDGQREFTGLGNCISKIFKSDGLTGLYRGFGVSVQGIIIYRAAY 346
YP D ++++ D + + C I+ GL G YRGF + A
Sbjct: 231 YPFDIVKSKIQTDGFLS--KATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 347 FGFYDT 364
F Y+T
Sbjct: 289 FYVYET 294
Score = 27.1 bits (57), Expect = 1.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 248 NCISKIFKSDGLTGLYRGFGVSVQGI 325
+C+ KI K++GL Y+G + + GI
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGI 85
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.1 bits (57), Expect = 1.5
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 254 ISKIFKSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGML 379
+ +I+K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.6 bits (56), Expect = 1.9
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +2
Query: 269 KSDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 448
+ +G+ L+RG V+ ++Y AA F + + + + +++ + A
Sbjct: 60 QKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNFLCGTSAGIFAT 119
Query: 449 IISYPFDT 472
+ SYP DT
Sbjct: 120 LTSYPLDT 127
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 26.2 bits (55), Expect = 2.5
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 272 SDGLTGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV 442
S G+TG+Y +Q I + GMLPDPK+ P++ +T V
Sbjct: 56 SHGITGIYPLHPSLIQRQIDACLSDIQCRVVKIGMLPDPKSIPVISQALTKYKITDV 112
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 3.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 9 QVLPDSGAQLRFQGQVQAGVPLVV 80
+ LPD +LRF+G+ + G VV
Sbjct: 211 RTLPDGSCKLRFEGEEEVGKETVV 234
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 3.4
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 305 GVSVQGIIIYRAAYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 448
G+ + G+I+ + Y+T R M+P P +S + T+ G
Sbjct: 12 GIPICGVILLILWGYSLYNTLRFMVPGKATEPFTLSLSDVSDDTSAPG 59
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.4 bits (53), Expect = 4.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 322 ALYGYTETSVQTSEAIRLEDLADAVTET 239
ALY YTE +Q +E ++LAD VTE+
Sbjct: 2390 ALYRYTE--LQEAERKSQQELADLVTES 2415
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.0 bits (52), Expect = 5.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 420 SRKPSPQSPVSSRIHSTR 473
SRKP P SP +R HS R
Sbjct: 84 SRKPLPASPSRTRDHSLR 101
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 24.6 bits (51), Expect = 7.8
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = +3
Query: 288 VCTEVSVYPYRASLSTVRHISVS 356
+C+E +YPY+ L+++ ++ V+
Sbjct: 382 ICSERDLYPYQMKLASLENLRVN 404
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 24.6 bits (51), Expect = 7.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 316 YGYTETSVQTSEAIRLEDLADAVTETGELALPITLANI 203
YGYT S S + ++AD + ETG L +L I
Sbjct: 1070 YGYTSASF--SGRMPCSEIADTIVETGREILSYSLEYI 1105
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,689,520
Number of Sequences: 5004
Number of extensions: 30456
Number of successful extensions: 157
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 182448900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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