Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C15
         (184 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   3.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    19   4.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   7.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    18   9.5  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 43  INYILFVNFTKY 78
           +NY  FVN T Y
Sbjct: 132 LNYSAFVNLTAY 143


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
          protein.
          Length = 232

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
 Frame = +1

Query: 25 SCKRSVINYILFV-NF 69
          SC   +I Y+LF+ NF
Sbjct: 2  SCGMGMIKYLLFIFNF 17


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -3

Query: 113 LDHYCTDRSTIKYLVKFTNKM*FMTLRLQEVQPSC 9
           +D +C     +KY VK T +   + + L  +  +C
Sbjct: 137 VDRFCAITKPLKYGVKRTPRRMIVYVSLVWLGAAC 171


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 4   IRHEGWTSCKRSVINYILFVNFTKYL 81
           ++  G T    SV +  +F+N  K+L
Sbjct: 322 LKRGGKTLTSISVESNTMFINILKFL 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,404
Number of Sequences: 438
Number of extensions: 507
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used:  2576460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)