Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C14
         (316 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical pr...    62   1e-10
AF016443-9|AAC24273.1|  364|Caenorhabditis elegans Hypothetical ...    31   0.13 
Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical p...    27   2.8  
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    27   2.8  
U50072-4|AAA93451.1|  250|Caenorhabditis elegans Cytochrome p450...    27   2.8  
AC024859-3|AAK29969.2|  871|Caenorhabditis elegans Hypothetical ...    27   2.8  
Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical pr...    27   3.8  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    26   5.0  
Z46791-7|CAA86760.2|  473|Caenorhabditis elegans Hypothetical pr...    26   6.6  
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc...    26   6.6  
AC006638-1|AAK85482.1|  495|Caenorhabditis elegans Cyclase assoc...    26   6.6  

>U58762-4|AAK39303.1|  109|Caenorhabditis elegans Hypothetical
           protein T27F7.3b protein.
          Length = 109

 Score = 61.7 bits (143), Expect = 1e-10
 Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = +1

Query: 151 MSIQNLNTFDPFADAIKS--SEDDVQDGLVHVRIQQRNGRKRLTTVQGLSSEYDLKK 315
           MSI NLN   P ADA +   +ED V+ G+ H+RIQQR GRK +TTVQG+ +EYDLK+
Sbjct: 1   MSIANLNR--P-ADAFEQLETEDGVRQGVCHIRIQQRTGRKTITTVQGIGTEYDLKR 54


>AF016443-9|AAC24273.1|  364|Caenorhabditis elegans Hypothetical
           protein C17E7.4 protein.
          Length = 364

 Score = 31.5 bits (68), Expect = 0.13
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 286 PAPWSIFYARSAAGFGRALDHLARRPPSF**HRRMGRMCSDS 161
           PAP S  Y      F R++D L   PPS+  +  +  +CS S
Sbjct: 258 PAPRSFAYPNPPLPFHRSMDFLNSGPPSYLYNENLSSLCSSS 299


>Z66495-11|CAK12849.1|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.3 protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 35  NWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHLRSIVCP 157
           N+S  S  TPP +I D+ + E      +    +H RS + P
Sbjct: 103 NFSNFSDRTPPPIIEDNKLKESLLQNTYESGWKHTRSAIAP 143


>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical
           protein C13F10.4 protein.
          Length = 2076

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 174 CVQILDGHTIERRCSLFQ*NAAIQRTS 94
           C++IL+G T E RC++ +  A +  TS
Sbjct: 228 CIKILEGSTYELRCAVAKFTAQLLATS 254


>U50072-4|AAA93451.1|  250|Caenorhabditis elegans Cytochrome p450
           family protein 25A6 protein.
          Length = 250

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 35  NWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHLRSIVCP 157
           N+S  S  TPP +I D+ + E      +    +H RS + P
Sbjct: 103 NFSNFSDRTPPPIIEDNKLKESLLQNTYESGWKHTRSAIAP 143


>AC024859-3|AAK29969.2|  871|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.10 protein.
          Length = 871

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 14  VHFGVRVNWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHL 139
           +   V  +W PV  N    V+S SY V  +C   FH   +HL
Sbjct: 90  IRIPVPFSWFPVDQNRTS-VLSVSYTVSEKCDQNFHDLPQHL 130


>Z79600-6|CAB01879.2|  529|Caenorhabditis elegans Hypothetical
           protein F59C6.8 protein.
          Length = 529

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 139 TFNRMSIQNLNTFDPF-ADAIKSSEDDVQDGL-VHVRIQQRNGRKRLTTV 282
           TFNR  I N   FDP+  +A K +   + DGL +  + + R  +  + T+
Sbjct: 398 TFNRSKISNPPFFDPYHLNATKRAIYKISDGLKIQRKFKNRVSQGTMKTI 447


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 106  TTHFNNITVTDNARRCVSADR*PIYADTKMY-WRL 5
            T HF+N +VTDN+   + + R  +YA   ++ W L
Sbjct: 1496 TYHFDNCSVTDNSGPIIESHR-DLYASANVFHWIL 1529


>Z46791-7|CAA86760.2|  473|Caenorhabditis elegans Hypothetical
           protein C09G5.1 protein.
          Length = 473

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 161 WMDIRLNVDALCFNETLRYNALQQYNC 81
           W D R+++  LC  +  RY  L   NC
Sbjct: 155 WYDCRISLTVLCMQDLARY-PLDSQNC 180


>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
            protein homologprotein 1, isoform a protein.
          Length = 1256

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 123  ETKSIYVQSYVHPESEHIRPIRRCYQKLGGRRARWSSA 236
            +T + YV+ ++     +I PI R +++   R   W+ A
Sbjct: 921  KTPAPYVKEFIEAAQFYINPILREFKETDPRHVEWTKA 958


>AC006638-1|AAK85482.1|  495|Caenorhabditis elegans Cyclase
           associated protein homologprotein 1, isoform b protein.
          Length = 495

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 123 ETKSIYVQSYVHPESEHIRPIRRCYQKLGGRRARWSSA 236
           +T + YV+ ++     +I PI R +++   R   W+ A
Sbjct: 160 KTPAPYVKEFIEAAQFYINPILREFKETDPRHVEWTKA 197


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,824,047
Number of Sequences: 27780
Number of extensions: 148542
Number of successful extensions: 390
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)