Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_C13
(358 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-1|CAA90247.1| 161|Caenorhabditis elegans Hypothetical pr... 81 2e-16
Z27079-13|CAA81597.2| 195|Caenorhabditis elegans Hypothetical p... 70 4e-13
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 30 0.41
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 30 0.41
U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical pr... 29 0.95
Z81051-1|CAB02862.3| 677|Caenorhabditis elegans Hypothetical pr... 27 2.9
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 27 2.9
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 27 2.9
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 27 2.9
Z81029-4|CAB02700.1| 300|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z72508-1|CAA96641.1| 342|Caenorhabditis elegans Hypothetical pr... 27 5.1
U67953-5|AAL13330.2| 287|Caenorhabditis elegans Male abnormal p... 27 5.1
AY742796-1|AAW59416.1| 287|Caenorhabditis elegans MAB-7 protein. 27 5.1
U64860-2|AAB04992.3| 373|Caenorhabditis elegans Hypothetical pr... 26 6.7
U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine rece... 26 6.7
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 26 8.9
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 26 8.9
U61954-9|AAK29808.1| 286|Caenorhabditis elegans Fatty acid elon... 26 8.9
U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidan... 26 8.9
>Z49967-1|CAA90247.1| 161|Caenorhabditis elegans Hypothetical
protein F54C9.1 protein.
Length = 161
Score = 81.0 bits (191), Expect = 2e-16
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +2
Query: 86 EDTHFETGDSGASATFPMQCSALRKNGFVMWKSRPCKIVEMSTSKT 223
+D HF TGDSGA+ATFP QCSALRKN VM K RPCKIVEMSTSKT
Sbjct: 7 DDEHFHTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKT 52
Score = 60.9 bits (141), Expect = 3e-10
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +3
Query: 189 PARLSRCPLPKRGKHGHAKVHLVGIDICNGKKYEDICPSTQNM 317
P ++ K GKHGHAKVH+V IDI KK EDICPST NM
Sbjct: 41 PCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNM 83
>Z27079-13|CAA81597.2| 195|Caenorhabditis elegans Hypothetical
protein T05G5.10 protein.
Length = 195
Score = 70.1 bits (164), Expect = 4e-13
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +2
Query: 86 EDTHFETGDSGASATFPMQCSALRKNGFVMWKSRPCKIVEMSTSKT 223
++ F++ +SGA+ATFP QCSALRKN VM + RPCKIVEMSTSKT
Sbjct: 41 DEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKT 86
Score = 60.5 bits (140), Expect = 3e-10
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = +3
Query: 180 RVAPARLSRCPLPKRGKHGHAKVHLVGIDICNGKKYEDICPSTQNM 317
R P ++ K GKHGHAKVH+V IDI KK EDICPST NM
Sbjct: 72 RGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNM 117
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1
Query: 229 LPRFGSGHLDNLAGATLPHYETVLTQGGALHG--KCCRGTGVSGL-EMCIFNVTHCVVCT 59
L + G G++ + T E ++ + LH + G G S L +MC FN C + T
Sbjct: 293 LTQLGYGNMTDQVAITTQAKEKMILKMSGLHPQRRAALGYGKSELIKMCSFNGQQCNIDT 352
Query: 58 EFQL 47
EF+L
Sbjct: 353 EFKL 356
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1
Query: 229 LPRFGSGHLDNLAGATLPHYETVLTQGGALHG--KCCRGTGVSGL-EMCIFNVTHCVVCT 59
L + G G++ + T E ++ + LH + G G S L +MC FN C + T
Sbjct: 293 LTQLGYGNMTDQVAITTQAKEKMILKMSGLHPQRRAALGYGKSELIKMCSFNGQQCNIDT 352
Query: 58 EFQL 47
EF+L
Sbjct: 353 EFKL 356
>U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical
protein F09F9.4 protein.
Length = 654
Score = 29.1 bits (62), Expect = 0.95
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 192 QGRLFHITKPFLRRAEHCMGNVAEAPESPVSKCVSSMSP 76
Q R+ +P +R+++C G + E E ++KC +M P
Sbjct: 337 QRRVRFCNEPVPKRSKYCDGPLIETQECTLTKCPEAMMP 375
>Z81051-1|CAB02862.3| 677|Caenorhabditis elegans Hypothetical
protein C55A6.2 protein.
Length = 677
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 137 MQCSALRKNGFVMWKSRPCKIVEMSTSKTWQ 229
MQCS+ + V+W P K V M WQ
Sbjct: 92 MQCSSKNPSVNVIWMGAPVKSVRMRELMPWQ 122
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long
isoform protein.
Length = 1187
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = +1
Query: 109 RLRCLGNISHAVLRPA*ERFRNVEESPLQDCRDVHFQNVANTVTLRFTWS 258
+++ + ++ +++ P + E+ P + RD H N T+ FTW+
Sbjct: 794 QVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRDFHIDTQINFTTINFTWN 843
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = +1
Query: 109 RLRCLGNISHAVLRPA*ERFRNVEESPLQDCRDVHFQNVANTVTLRFTWS 258
+++ + ++ +++ P + E+ P + RD H N T+ FTW+
Sbjct: 794 QVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRDFHIDTQINFTTINFTWN 843
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = +1
Query: 109 RLRCLGNISHAVLRPA*ERFRNVEESPLQDCRDVHFQNVANTVTLRFTWS 258
+++ + ++ +++ P + E+ P + RD H N T+ FTW+
Sbjct: 794 QVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRDFHIDTQINFTTINFTWN 843
>Z81029-4|CAB02700.1| 300|Caenorhabditis elegans Hypothetical
protein C01A2.5 protein.
Length = 300
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -2
Query: 342 FAFNVGNVPCSGWRGKYLHISCHCIYQCRPSEP*RDRVCHV 220
F + NVP +G + ++ C C+Y + + + CHV
Sbjct: 115 FICPITNVPMNGIQSFLVNWQCGCVYSEKAQQEVKSSNCHV 155
>Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical
protein ZK262.10 protein.
Length = 335
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 66 CVLSFNYGKE*YVTDGFF 13
CV+ +NY YV DG+F
Sbjct: 64 CVIDYNYAFSYYVVDGYF 81
>Z72508-1|CAA96641.1| 342|Caenorhabditis elegans Hypothetical
protein F28H7.1 protein.
Length = 342
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 75 IVLCVLSFNYGKE*YVTDGFF 13
+ +CVL++ Y +V+DGFF
Sbjct: 61 VPMCVLNYRYAFSVFVSDGFF 81
>U67953-5|AAL13330.2| 287|Caenorhabditis elegans Male abnormal
protein 7 protein.
Length = 287
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 312 SGWRGKYLHISCHCIYQCRPSEP*RDRVCHVL 217
+GW G+Y H C IY+ D+ CH +
Sbjct: 60 TGWMGRYCHRKCRNIYKSCDRWAVEDK-CHTI 90
>AY742796-1|AAW59416.1| 287|Caenorhabditis elegans MAB-7 protein.
Length = 287
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 312 SGWRGKYLHISCHCIYQCRPSEP*RDRVCHVL 217
+GW G+Y H C IY+ D+ CH +
Sbjct: 60 TGWMGRYCHRKCRNIYKSCDRWAVEDK-CHTI 90
>U64860-2|AAB04992.3| 373|Caenorhabditis elegans Hypothetical
protein R106.2 protein.
Length = 373
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 335 LTWGTSHVLGGGANIFIFLAIAYINADQVNLSVTVF 228
LTW + ++G AN+F+ AI Y + ++ +F
Sbjct: 23 LTWCLTALIGIPANLFVLAAIVYFRDMRTISNIYIF 58
>U00049-1|AAC47053.2| 288|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 1 protein.
Length = 288
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -3
Query: 296 NIFIFLAIAYINADQVNLSVTVFATFWKWTSR 201
N+ +FL + Y+ + LS ++ T WK+ +
Sbjct: 22 NLKLFLQLCYLTPSALFLSRVIYITAWKYRKK 53
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 226 PRFGSGHLDNLAGATLPHYETVLTQGGALHGKCCRGTGV 110
P +GS + AGA L E + HGKCC TG+
Sbjct: 199 PTYGS---EEAAGADLYSAEDITVPA---HGKCCVSTGI 231
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 217 GSGHLDNLAGATLPHYETV 161
G HLDNL G P YE V
Sbjct: 57 GEMHLDNLVGHVAPGYEKV 75
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 226 PRFGSGHLDNLAGATLPHYETVLTQGGALHGKCCRGTGV 110
P +GS + AGA L E + HGKCC TG+
Sbjct: 199 PTYGS---EEAAGADLYSAEDITVPA---HGKCCVSTGI 231
>U61954-9|AAK29808.1| 286|Caenorhabditis elegans Fatty acid
elongation protein 5 protein.
Length = 286
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 128 TFPMQCSALRKNGFVMWKSRPCKIVEMSTSKTW 226
TFP S +RK+GF S ++ STS W
Sbjct: 86 TFPTLLSVIRKDGFSHTYSHVSELYTDSTSGYW 118
>U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidance
abnormal protein10 protein.
Length = 419
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +2
Query: 62 THNTMGDIEDTHFETGDSGASATFPMQCSALRKNGFVMWKSRPCKIVEMSTSKTWQT 232
T + D+E+ E GDS SAT P + K R K + T+ WQ+
Sbjct: 141 TEKLVKDLENVKLEKGDSRESATLPTPKQYPASDDEEDTKER--KSLRFGTTTEWQS 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,968,791
Number of Sequences: 27780
Number of extensions: 225050
Number of successful extensions: 674
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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