Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_C12
(386 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 99 6e-21
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 99 6e-21
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 99 6e-21
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 99 6e-21
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 99 6e-21
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 99 6e-21
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 85 8e-17
X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a pr... 38 0.009
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 30 3.0
AY043325-1|AAL10682.1| 1406|Homo sapiens CRB1 isoform II precurs... 29 4.0
AY043324-1|AAL10681.1| 1376|Homo sapiens CRB1 isoform I precurso... 29 4.0
AL513325-3|CAM17208.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 29 4.0
AL513325-2|CAH72584.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 29 4.0
AL139136-3|CAM21656.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 29 4.0
AL139136-2|CAI15311.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 29 4.0
AL136322-4|CAM23328.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 29 4.0
AL136322-3|CAI16646.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 29 4.0
AJ748821-1|CAG38658.1| 1294|Homo sapiens crumbs homologue 1 (alt... 29 4.0
AF154671-1|AAF01361.1| 1376|Homo sapiens CRB1 protein. 29 4.0
AB208923-1|BAD92160.1| 441|Homo sapiens crumbs homolog 1 isofor... 29 4.0
U57057-1|AAB47807.1| 525|Homo sapiens WD protein IR10 protein. 29 6.9
BC011690-1|AAH11690.1| 525|Homo sapiens coronin, actin binding ... 29 6.9
BC000010-1|AAH00010.1| 525|Homo sapiens coronin, actin binding ... 29 6.9
AL137073-9|CAI13893.1| 525|Homo sapiens coronin, actin binding ... 29 6.9
AK128124-1|BAC87282.1| 680|Homo sapiens protein ( Homo sapiens ... 28 9.1
AK125949-1|BAC86357.1| 1014|Homo sapiens protein ( Homo sapiens ... 28 9.1
AB209087-1|BAD92324.1| 678|Homo sapiens Hypothetical protein FL... 28 9.1
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 98.7 bits (235), Expect = 6e-21
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +2
Query: 164 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAEKRTPIPGG 343
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+A+ T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 344 PRGKKTKLRAIWGK 385
GK K R IWGK
Sbjct: 62 --GKPNKTRVIWGK 73
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 98.7 bits (235), Expect = 6e-21
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +2
Query: 164 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAEKRTPIPGG 343
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+A+ T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 344 PRGKKTKLRAIWGK 385
GK K R IWGK
Sbjct: 62 --GKPNKTRVIWGK 73
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 98.7 bits (235), Expect = 6e-21
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +2
Query: 164 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAEKRTPIPGG 343
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+A+ T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 344 PRGKKTKLRAIWGK 385
GK K R IWGK
Sbjct: 62 --GKPNKTRVIWGK 73
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 98.7 bits (235), Expect = 6e-21
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +2
Query: 164 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAEKRTPIPGG 343
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+A+ T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 344 PRGKKTKLRAIWGK 385
GK K R IWGK
Sbjct: 62 --GKPNKTRVIWGK 73
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 98.7 bits (235), Expect = 6e-21
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +2
Query: 164 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAEKRTPIPGG 343
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+A+ T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 344 PRGKKTKLRAIWGK 385
GK K R IWGK
Sbjct: 62 --GKPNKTRVIWGK 73
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 98.7 bits (235), Expect = 6e-21
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = +2
Query: 164 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAEKRTPIPGG 343
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+A+ T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 344 PRGKKTKLRAIWGK 385
GK K R IWGK
Sbjct: 62 --GKPNKTRVIWGK 73
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 85.0 bits (201), Expect = 8e-17
Identities = 41/74 (55%), Positives = 50/74 (67%)
Frame = +2
Query: 164 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAEKRTPIPGG 343
GRL++K+ F GYKR L+NQ E+TALLKIEG + + FY GKRC VY+A+ T IPG
Sbjct: 2 GRLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG- 60
Query: 344 PRGKKTKLRAIWGK 385
K K R IWGK
Sbjct: 61 --SKPNKSRVIWGK 72
>X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a
protein.
Length = 21
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 164 GRLYAKAVFTGYKRGLRNQ 220
GRL++KA+F GYKRGLRNQ
Sbjct: 3 GRLWSKAIFAGYKRGLRNQ 21
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Frame = -1
Query: 386 PCPRLHEA*FSCHVDPRGSASFSLHGRHTRNACQHRKVHHCDPL-----YPQSLTKLYFH 222
P PRLH D ++S H HT N H + H DPL +P + + H
Sbjct: 376 PQPRLHSHPLLQPRDGTHASSVDQHNHHTHNHHTHNQWLHGDPLLHPGDHPHRQSADHHH 435
Query: 221 VGCA 210
CA
Sbjct: 436 HNCA 439
>AY043325-1|AAL10682.1| 1406|Homo sapiens CRB1 isoform II precursor
protein.
Length = 1406
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AY043324-1|AAL10681.1| 1376|Homo sapiens CRB1 isoform I precursor
protein.
Length = 1376
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AL513325-3|CAM17208.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AL513325-2|CAH72584.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AL139136-3|CAM21656.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AL139136-2|CAI15311.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AL136322-4|CAM23328.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AL136322-3|CAI16646.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AJ748821-1|CAG38658.1| 1294|Homo sapiens crumbs homologue 1
(alternative protein) protein.
Length = 1294
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AF154671-1|AAF01361.1| 1376|Homo sapiens CRB1 protein.
Length = 1376
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 94 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 132
>AB208923-1|BAD92160.1| 441|Homo sapiens crumbs homolog 1 isoform
II precursor variant protein.
Length = 441
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 359 FSCHVDP--RGSASFSLHGRHTRNACQHRKVHHCDPLYP 249
F C P G+ + G +N+CQH + H DP+YP
Sbjct: 119 FLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYP 157
>U57057-1|AAB47807.1| 525|Homo sapiens WD protein IR10 protein.
Length = 525
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 356 SCHVDPRGSASFSLHGRHTRNACQHRKVHHCDP 258
SCH D S SF+ +G C+ RK+ DP
Sbjct: 177 SCHQDVILSMSFNTNGSLLATTCKDRKIRVIDP 209
>BC011690-1|AAH11690.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 356 SCHVDPRGSASFSLHGRHTRNACQHRKVHHCDP 258
SCH D S SF+ +G C+ RK+ DP
Sbjct: 177 SCHQDVILSMSFNTNGSLLATTCKDRKIRVIDP 209
>BC000010-1|AAH00010.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 356 SCHVDPRGSASFSLHGRHTRNACQHRKVHHCDP 258
SCH D S SF+ +G C+ RK+ DP
Sbjct: 177 SCHQDVILSMSFNTNGSLLATTCKDRKIRVIDP 209
>AL137073-9|CAI13893.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 356 SCHVDPRGSASFSLHGRHTRNACQHRKVHHCDP 258
SCH D S SF+ +G C+ RK+ DP
Sbjct: 177 SCHQDVILSMSFNTNGSLLATTCKDRKIRVIDP 209
>AK128124-1|BAC87282.1| 680|Homo sapiens protein ( Homo sapiens
cDNA FLJ46245 fis, clone TESTI4020596, highly similar
to Homo sapiens calpain 5 (CAPN5). ).
Length = 680
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 386 PCPRLHEA*FSCHVDPRGSASFSLHGRHTRNACQHRKVHHCDPLYPQSLTKLYF 225
P P FSC V P ++S R C+ RKV DPL+P + LY+
Sbjct: 33 PLPGAAATMFSC-VKPYEDQNYSA----LRRDCRRRKVLFEDPLFPATDDSLYY 81
>AK125949-1|BAC86357.1| 1014|Homo sapiens protein ( Homo sapiens
cDNA FLJ43961 fis, clone TESTI4016812. ).
Length = 1014
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 341 PRGSASFSLHGRHTRNACQHRKVHHCDPLYPQ 246
PRGS +S H H + CQH HH PQ
Sbjct: 772 PRGSWRWS-HSFHLADPCQHSPQHHPQLKLPQ 802
>AB209087-1|BAD92324.1| 678|Homo sapiens Hypothetical protein
FLJ46245 variant protein.
Length = 678
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 386 PCPRLHEA*FSCHVDPRGSASFSLHGRHTRNACQHRKVHHCDPLYPQSLTKLYF 225
P P FSC V P ++S R C+ RKV DPL+P + LY+
Sbjct: 31 PLPGAAATMFSC-VKPYEDQNYSA----LRRDCRRRKVLFEDPLFPATDDSLYY 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,781,524
Number of Sequences: 237096
Number of extensions: 1066224
Number of successful extensions: 3174
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3174
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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