Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C09
         (179 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   1.0  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   1.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   1.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   1.4  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   1.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   7.2  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 116 NDGGGRILSP 145
           NDG G ILSP
Sbjct: 358 NDGNGNILSP 367


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  KKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 168
           ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 32  QEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  KKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 168
           ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 32  QEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  KKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 168
           ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 32  QEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  KKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 168
           ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 32  QEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  KKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 168
           ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 32  QEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  KKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 168
           ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 32  QEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  KKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 168
           ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 32  QEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  KKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 168
           ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 32  QEERLRRRREWMIQQEREREHERLKKKMILEY 63


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -1

Query: 104 LVRRYHNRFFLIIVSLKFLF 45
           + + YH  FF+++++L FL+
Sbjct: 1   MFKNYHF-FFILVITLIFLY 19


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 36  PMIYAVINR 10
           P+IYA +NR
Sbjct: 424 PIIYATLNR 432


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,815
Number of Sequences: 438
Number of extensions: 938
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)