Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C08
         (171 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25825 Cluster: ORF105 protein; n=1; Plasmodium falcipa...    31   6.7  
UniRef50_Q2F959 Cluster: Putative uncharacterized protein orf284...    30   8.8  

>UniRef50_Q25825 Cluster: ORF105 protein; n=1; Plasmodium
           falciparum|Rep: ORF105 protein - Plasmodium falciparum
          Length = 121

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -2

Query: 170 MIYLKLNNILFKQKSLN**HKNIINDTYIEVQSRFAHSKAFFYFLL 33
           ++Y+KL NIL K K+ N    NIIN+ Y  ++  +  S   +  LL
Sbjct: 46  IVYIKLFNILLKSKNSNNYIYNIINNKYKNIKLLYILSNNKYNLLL 91


>UniRef50_Q2F959 Cluster: Putative uncharacterized protein orf284;
           n=2; Oryza sativa|Rep: Putative uncharacterized protein
           orf284 - Oryza sativa subsp. indica (Rice)
          Length = 284

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
 Frame = +2

Query: 20  ILKLITKNRKRL*NV---QIYFVLLCMYHL*YFYVINSMIFV*IIYYLILGI 166
           +LK + + +KR+ +     IYF +LC+ +L +F  I+ ++F+ + Y ++L I
Sbjct: 32  VLKSLQERKKRISSEISSTIYFYMLCIPYLIFFLKISILVFL-VFYRIVLPI 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,029,280
Number of Sequences: 1657284
Number of extensions: 1413441
Number of successful extensions: 4037
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4035
length of database: 575,637,011
effective HSP length: 36
effective length of database: 515,974,787
effective search space used: 10319495740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)