Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C08
         (171 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   0.45 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   0.45 
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    19   5.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    18   9.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 79  YKVDLHILKPFSIFCY 32
           Y V+LH   PFSI+ +
Sbjct: 466 YNVELHNSSPFSIYSF 481


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 79  YKVDLHILKPFSIFCY 32
           Y V+LH   PFSI+ +
Sbjct: 504 YNVELHNSSPFSIYSF 519


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 56  KAFFYFLLLILKCLVFTS 3
           +  FY   LIL C++  S
Sbjct: 212 RPMFYVFNLILPCILINS 229


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 20  ILKLITKNRKR 52
           +LKL+TK R R
Sbjct: 333 VLKLLTKPRAR 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,358
Number of Sequences: 438
Number of extensions: 395
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 36
effective length of database: 130,575
effective search space used:  2611500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)