Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C07
         (415 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537440-1|CAD97682.1|   76|Homo sapiens hypothetical protein pr...    67   2e-11
BC007515-1|AAH07515.1|   76|Homo sapiens heat shock factor bindi...    67   2e-11
AF068754-1|AAC25186.1|   76|Homo sapiens heat shock factor bindi...    67   2e-11
BC111559-1|AAI11560.1|  865|Homo sapiens LINE-1 type transposase...    30   2.6  
AL162739-7|CAI19299.1|  865|Homo sapiens novel protein (FLJ10884...    30   2.6  
AK001973-1|BAA92011.1|  865|Homo sapiens protein ( Homo sapiens ...    30   2.6  
AB211065-1|BAD95492.1|  865|Homo sapiens ES cell associated tran...    30   2.6  

>BX537440-1|CAD97682.1|   76|Homo sapiens hypothetical protein
           protein.
          Length = 76

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +3

Query: 231 DPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDITDLMTEAGVE 407
           DPK +Q++T     T  +    +FQ+MSDQII RID+M +R+D+LEK+I DLMT+AGVE
Sbjct: 5   DPKTVQDLTSV-VQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVE 62


>BC007515-1|AAH07515.1|   76|Homo sapiens heat shock factor binding
           protein 1 protein.
          Length = 76

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +3

Query: 231 DPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDITDLMTEAGVE 407
           DPK +Q++T     T  +    +FQ+MSDQII RID+M +R+D+LEK+I DLMT+AGVE
Sbjct: 5   DPKTVQDLTSV-VQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVE 62


>AF068754-1|AAC25186.1|   76|Homo sapiens heat shock factor binding
           protein 1 HSBP1 protein.
          Length = 76

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +3

Query: 231 DPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDITDLMTEAGVE 407
           DPK +Q++T     T  +    +FQ+MSDQII RID+M +R+D+LEK+I DLMT+AGVE
Sbjct: 5   DPKTVQDLTSV-VQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVE 62


>BC111559-1|AAI11560.1|  865|Homo sapiens LINE-1 type transposase
           domain containing 1 protein.
          Length = 865

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/73 (23%), Positives = 36/73 (49%)
 Frame = +3

Query: 165 MAEQPTDTVAIPTENEYSTPANDPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEM 344
           +  +  D      EN  S+  N  + ++E  + G + S+   ++E ++  D + +R+D +
Sbjct: 602 LTSKEADLTEETEENLRSSVINSIREIKE--EIGNLKSSHSGVLEIENSVDDLSSRMDIL 659

Query: 345 GTRVDELEKDITD 383
             R+D LE  I +
Sbjct: 660 EERIDSLEDQIEE 672


>AL162739-7|CAI19299.1|  865|Homo sapiens novel protein (FLJ10884)
           protein.
          Length = 865

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/73 (23%), Positives = 36/73 (49%)
 Frame = +3

Query: 165 MAEQPTDTVAIPTENEYSTPANDPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEM 344
           +  +  D      EN  S+  N  + ++E  + G + S+   ++E ++  D + +R+D +
Sbjct: 602 LTSKEADLTEETEENLRSSVINSIREIKE--EIGNLKSSHSGVLEIENSVDDLSSRMDIL 659

Query: 345 GTRVDELEKDITD 383
             R+D LE  I +
Sbjct: 660 EERIDSLEDQIEE 672


>AK001973-1|BAA92011.1|  865|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11111 fis, clone PLACE1005923. ).
          Length = 865

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/73 (23%), Positives = 36/73 (49%)
 Frame = +3

Query: 165 MAEQPTDTVAIPTENEYSTPANDPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEM 344
           +  +  D      EN  S+  N  + ++E  + G + S+   ++E ++  D + +R+D +
Sbjct: 602 LTSKEADLTEETEENLRSSVINSIREIKE--EIGNLKSSHSGVLEIENSVDDLSSRMDIL 659

Query: 345 GTRVDELEKDITD 383
             R+D LE  I +
Sbjct: 660 EERIDSLEDQIEE 672


>AB211065-1|BAD95492.1|  865|Homo sapiens ES cell associated
           transcript 11 protein.
          Length = 865

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/73 (23%), Positives = 36/73 (49%)
 Frame = +3

Query: 165 MAEQPTDTVAIPTENEYSTPANDPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEM 344
           +  +  D      EN  S+  N  + ++E  + G + S+   ++E ++  D + +R+D +
Sbjct: 602 LTSKEADLTEETEENLRSSVINSIREIKE--EIGNLKSSHSGVLEIENSVDDLSSRMDIL 659

Query: 345 GTRVDELEKDITD 383
             R+D LE  I +
Sbjct: 660 EERIDSLEDQIEE 672


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,704,547
Number of Sequences: 237096
Number of extensions: 1092035
Number of successful extensions: 1960
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1960
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)