Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_C07
(415 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY274396-1|AAP31550.1| 82|Drosophila melanogaster HSBP1-like p... 75 4e-14
AY274393-1|AAP31547.1| 82|Drosophila melanogaster HSBP1-like p... 75 4e-14
AY274394-1|AAP31548.1| 82|Drosophila melanogaster HSBP1-like p... 75 5e-14
AE014134-2199|AAF53188.1| 86|Drosophila melanogaster CG5446-PA... 75 5e-14
AY274395-1|AAP31549.1| 82|Drosophila melanogaster HSBP1-like p... 73 2e-13
AY095512-1|AAM12246.1| 418|Drosophila melanogaster AT26524p pro... 31 0.80
AE014134-64|AAF51528.1| 443|Drosophila melanogaster CG13693-PA ... 31 0.80
BT010009-1|AAQ22478.1| 2051|Drosophila melanogaster RE22882p pro... 29 2.4
AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p pro... 29 2.4
AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein... 29 2.4
AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subu... 29 2.4
AF106933-1|AAD09426.1| 2051|Drosophila melanogaster plexin B pro... 29 2.4
AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA... 29 2.4
AE014135-2|AAF59374.2| 2051|Drosophila melanogaster CG17245-PA p... 29 2.4
BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p pro... 27 7.4
AY051885-1|AAK93309.1| 731|Drosophila melanogaster LD37351p pro... 27 7.4
AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-P... 27 7.4
AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-P... 27 7.4
AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA... 27 7.4
X58286-1|CAA41222.1| 90|Drosophila melanogaster z600 protein p... 27 9.8
BT029402-1|ABK57059.1| 90|Drosophila melanogaster IP02172p pro... 27 9.8
BT023336-1|AAY55752.1| 90|Drosophila melanogaster IP02169p pro... 27 9.8
AE014296-2512|AAF49634.1| 90|Drosophila melanogaster CG17962-P... 27 9.8
>AY274396-1|AAP31550.1| 82|Drosophila melanogaster HSBP1-like
protein protein.
Length = 82
Score = 74.9 bits (176), Expect = 4e-14
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +3
Query: 204 ENEYSTPAN-DPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDIT 380
+ +YS +N DPKNMQE+T Y + +FQ+MSDQII RID+MG R+D+LEK I
Sbjct: 9 DQKYSLNSNADPKNMQELTIY-VQNLLQNVQDKFQTMSDQIITRIDDMGNRIDDLEKSIA 67
Query: 381 DLMTEAGVENE 413
DLM +AG+E +
Sbjct: 68 DLMNQAGIEGQ 78
>AY274393-1|AAP31547.1| 82|Drosophila melanogaster HSBP1-like
protein protein.
Length = 82
Score = 74.9 bits (176), Expect = 4e-14
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +3
Query: 204 ENEYSTPAN-DPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDIT 380
+ +YS +N DPKNMQE+T Y + +FQ+MSDQII RID+MG R+D+LEK I
Sbjct: 9 DQKYSLNSNADPKNMQELTIY-VQNLLQNVQDKFQTMSDQIITRIDDMGNRIDDLEKSIA 67
Query: 381 DLMTEAGVENE 413
DLM +AG+E +
Sbjct: 68 DLMNQAGIEGQ 78
>AY274394-1|AAP31548.1| 82|Drosophila melanogaster HSBP1-like
protein protein.
Length = 82
Score = 74.5 bits (175), Expect = 5e-14
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 204 ENEYSTPAN-DPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDIT 380
+ YS +N DPKNMQE+T Y + +FQ+MSDQII RID+MG R+D+LEK I
Sbjct: 9 DQNYSLNSNADPKNMQELTIY-VQNLLQNVQDKFQTMSDQIITRIDDMGNRIDDLEKSIA 67
Query: 381 DLMTEAGVENE 413
DLM +AG+E +
Sbjct: 68 DLMNQAGIEGQ 78
>AE014134-2199|AAF53188.1| 86|Drosophila melanogaster CG5446-PA
protein.
Length = 86
Score = 74.5 bits (175), Expect = 5e-14
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 204 ENEYSTPAN-DPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDIT 380
+ YS +N DPKNMQE+T Y + +FQ+MSDQII RID+MG R+D+LEK I
Sbjct: 13 DQNYSLNSNADPKNMQELTIY-VQNLLQNVQDKFQTMSDQIITRIDDMGNRIDDLEKSIA 71
Query: 381 DLMTEAGVENE 413
DLM +AG+E +
Sbjct: 72 DLMNQAGIEGQ 82
>AY274395-1|AAP31549.1| 82|Drosophila melanogaster HSBP1-like
protein protein.
Length = 82
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 204 ENEYSTPAN-DPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDIT 380
+ +YS +N DPKNMQE+T Y + +FQ+MSDQII RID+MG R+D+LEK I
Sbjct: 9 DQKYSLNSNADPKNMQELTIY-VQNLLQNVQDKFQTMSDQIITRIDDMGNRIDDLEKSIA 67
Query: 381 DLMTEAGVENE 413
DL +AG+E +
Sbjct: 68 DLTNQAGIEGQ 78
>AY095512-1|AAM12246.1| 418|Drosophila melanogaster AT26524p
protein.
Length = 418
Score = 30.7 bits (66), Expect = 0.80
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 267 AVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDI 377
A+T K AM+ ++ ++NR DE+ + +LEK++
Sbjct: 334 AMTEEKQAMMNLETEMRTVLNRTDEVTRAIQKLEKEV 370
>AE014134-64|AAF51528.1| 443|Drosophila melanogaster CG13693-PA
protein.
Length = 443
Score = 30.7 bits (66), Expect = 0.80
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 267 AVTSTKYAMIEFQSMSDQIINRIDEMGTRVDELEKDI 377
A+T K AM+ ++ ++NR DE+ + +LEK++
Sbjct: 334 AMTEEKQAMMNLETEMRTVLNRTDEVTRAIQKLEKEV 370
>BT010009-1|AAQ22478.1| 2051|Drosophila melanogaster RE22882p protein.
Length = 2051
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 245 AGGDPIWCSHFYKVCNDRISKYVRSDY 325
+GG P + SH CNDR++K + Y
Sbjct: 1807 SGGSPAFQSHVVNNCNDRVNKTIPEVY 1833
>AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 204 ENEYSTPANDPKNMQEVTQYGAVT--STKYAMIEFQSMSDQIINRIDEMGTRVDELEK 371
++E +T + K ++ +Y V S+K ++ ++ + Q+ +++DE G ++ E+E+
Sbjct: 721 QSELATVESQIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIER 778
>AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 204 ENEYSTPANDPKNMQEVTQYGAVT--STKYAMIEFQSMSDQIINRIDEMGTRVDELEK 371
++E +T + K ++ +Y V S+K ++ ++ + Q+ +++DE G ++ E+E+
Sbjct: 721 QSELATVESQIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIER 778
>AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subunit
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 204 ENEYSTPANDPKNMQEVTQYGAVT--STKYAMIEFQSMSDQIINRIDEMGTRVDELEK 371
++E +T + K ++ +Y V S+K ++ ++ + Q+ +++DE G ++ E+E+
Sbjct: 721 QSELATVESQIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIER 778
>AF106933-1|AAD09426.1| 2051|Drosophila melanogaster plexin B protein.
Length = 2051
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 245 AGGDPIWCSHFYKVCNDRISKYVRSDY 325
+GG P + SH CNDR++K + Y
Sbjct: 1807 SGGSPAFQSHVVNNCNDRVNKTIPEVY 1833
>AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 204 ENEYSTPANDPKNMQEVTQYGAVT--STKYAMIEFQSMSDQIINRIDEMGTRVDELEK 371
++E +T + K ++ +Y V S+K ++ ++ + Q+ +++DE G ++ E+E+
Sbjct: 721 QSELATVESQIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIER 778
>AE014135-2|AAF59374.2| 2051|Drosophila melanogaster CG17245-PA
protein.
Length = 2051
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 245 AGGDPIWCSHFYKVCNDRISKYVRSDY 325
+GG P + SH CNDR++K + Y
Sbjct: 1807 SGGSPAFQSHVVNNCNDRVNKTIPEVY 1833
>BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p
protein.
Length = 1199
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +3
Query: 165 MAEQPTDTVAIPTENEYSTPANDPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRID 338
+ E TDT+ I ++NE P+ QE Q A+ E Q N+ D
Sbjct: 640 IVEPKTDTITIDSDNEDDMPSTSTATQQEQPQETAIMKITSVTSEASKKELQENNQAD 697
>AY051885-1|AAK93309.1| 731|Drosophila melanogaster LD37351p
protein.
Length = 731
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +3
Query: 165 MAEQPTDTVAIPTENEYSTPANDPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRID 338
+ E TDT+ I ++NE P+ QE Q A+ E Q N+ D
Sbjct: 172 IVEPKTDTITIDSDNEDDMPSTSTATQQEQPQETAIMKITSVTSEASKKELQENNQAD 229
>AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-PB,
isoform B protein.
Length = 1259
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 293 HCILCRSDCTI--LGHLLHILWIVRWCRVFIFSWDCYCIRRLF 171
+CIL T +GH+L L+ V W +++ +W Y + F
Sbjct: 322 YCILWGKGQTAQDMGHVLFSLFNVAWASLYLEAWKRYSVELAF 364
>AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-PA,
isoform A protein.
Length = 1338
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 293 HCILCRSDCTI--LGHLLHILWIVRWCRVFIFSWDCYCIRRLF 171
+CIL T +GH+L L+ V W +++ +W Y + F
Sbjct: 322 YCILWGKGQTAQDMGHVLFSLFNVAWASLYLEAWKRYSVELAF 364
>AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA,
isoform A protein.
Length = 1199
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +3
Query: 165 MAEQPTDTVAIPTENEYSTPANDPKNMQEVTQYGAVTSTKYAMIEFQSMSDQIINRID 338
+ E TDT+ I ++NE P+ QE Q A+ E Q N+ D
Sbjct: 640 IVEPKTDTITIDSDNEDDMPSTSTATQQEQPQETAIMKITSVTSEASKKELQENNQAD 697
>X58286-1|CAA41222.1| 90|Drosophila melanogaster z600 protein
protein.
Length = 90
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 134 CYSXTKQRYSIILIFEQSYTHGKLNAKNKLQSKWLQYKHYT 12
CYS ++YS++ S HGK + K + K + YT
Sbjct: 34 CYSLDSKKYSLVPATPSSSGHGKFQTELKKRRKNKLNRMYT 74
>BT029402-1|ABK57059.1| 90|Drosophila melanogaster IP02172p
protein.
Length = 90
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 134 CYSXTKQRYSIILIFEQSYTHGKLNAKNKLQSKWLQYKHYT 12
CYS ++YS++ S HGK + K + K + YT
Sbjct: 34 CYSLDSKKYSLVPATPSSSGHGKFQTELKKRRKNKLNRMYT 74
>BT023336-1|AAY55752.1| 90|Drosophila melanogaster IP02169p
protein.
Length = 90
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 134 CYSXTKQRYSIILIFEQSYTHGKLNAKNKLQSKWLQYKHYT 12
CYS ++YS++ S HGK + K + K + YT
Sbjct: 34 CYSLDSKKYSLVPATPSSSGHGKFQTELKKRRKNKLNRMYT 74
>AE014296-2512|AAF49634.1| 90|Drosophila melanogaster CG17962-PA
protein.
Length = 90
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 134 CYSXTKQRYSIILIFEQSYTHGKLNAKNKLQSKWLQYKHYT 12
CYS ++YS++ S HGK + K + K + YT
Sbjct: 34 CYSLDSKKYSLVPATPSSSGHGKFQTELKKRRKNKLNRMYT 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,284,201
Number of Sequences: 53049
Number of extensions: 328383
Number of successful extensions: 968
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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