Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C05
         (264 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...    44   2e-05
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...    44   2e-05
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...    44   2e-05
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...    44   2e-05
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...    44   2e-05
BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p pro...    26   6.3  
BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p pro...    26   6.3  
BT023033-1|AAY55449.1|  186|Drosophila melanogaster IP04035p pro...    26   6.3  
BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p pro...    26   6.3  
AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-P...    26   6.3  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 191 EKRTKNFAIGQDIQPTRDLSRFVR 262
           EKR KNF IGQ++QP RDLSRFVR
Sbjct: 38  EKRPKNFGIGQNVQPKRDLSRFVR 61


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 191 EKRTKNFAIGQDIQPTRDLSRFVR 262
           EKR KNF IGQ++QP RDLSRFVR
Sbjct: 38  EKRPKNFGIGQNVQPKRDLSRFVR 61


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 191 EKRTKNFAIGQDIQPTRDLSRFVR 262
           EKR KNF IGQ++QP RDLSRFVR
Sbjct: 38  EKRPKNFGIGQNVQPKRDLSRFVR 61


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 191 EKRTKNFAIGQDIQPTRDLSRFVR 262
           EKR KNF IGQ++QP RDLSRFVR
Sbjct: 38  EKRPKNFGIGQNVQPKRDLSRFVR 61


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +2

Query: 191 EKRTKNFAIGQDIQPTRDLSRFVR 262
           EKR KNF IGQ++QP RDLSRFVR
Sbjct: 38  EKRPKNFGIGQNVQPKRDLSRFVR 61


>BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p
           protein.
          Length = 818

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 162 AQEDCKPSIPRREQRTLLLARTSSQPEI 245
           A  DC P++PR + +  LL R  S  E+
Sbjct: 745 AHGDCAPNLPRCQPKQKLLRRQKSTSEL 772


>BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p
           protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 162 AQEDCKPSIPRREQRTLLLARTSSQPEI 245
           A  DC P++PR + +  LL R  S  E+
Sbjct: 520 AHGDCAPNLPRCQPKQKLLRRQKSTSEL 547


>BT023033-1|AAY55449.1|  186|Drosophila melanogaster IP04035p
           protein.
          Length = 186

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 162 AQEDCKPSIPRREQRTLLLARTSSQPEI 245
           A  DC P++PR + +  LL R  S  E+
Sbjct: 113 AHGDCAPNLPRCQPKQKLLRRQKSTSEL 140


>BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p
           protein.
          Length = 148

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 162 AQEDCKPSIPRREQRTLLLARTSSQPEI 245
           A  DC P++PR + +  LL R  S  E+
Sbjct: 82  AHGDCAPNLPRCQPKQKLLRRQKSTSEL 109


>AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-PA
           protein.
          Length = 165

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 162 AQEDCKPSIPRREQRTLLLARTSSQPEI 245
           A  DC P++PR + +  LL R  S  E+
Sbjct: 99  AHGDCAPNLPRCQPKQKLLRRQKSTSEL 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,672,434
Number of Sequences: 53049
Number of extensions: 129611
Number of successful extensions: 296
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)