Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_C03
         (445 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p pro...   167   6e-42
AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p pro...   167   6e-42
AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA...   167   6e-42
M97259-1|AAA28497.1|  341|Drosophila melanogaster ecdysone-induc...    31   0.93 
BT012464-1|AAS93735.1|  340|Drosophila melanogaster RE44872p pro...    31   0.93 
AY069742-1|AAL39887.2|  372|Drosophila melanogaster LP07125p pro...    31   0.93 
AE014296-2263|AAF49828.1|  341|Drosophila melanogaster CG10717-P...    31   0.93 
AE014296-2262|AAN11832.1|  366|Drosophila melanogaster CG10717-P...    31   0.93 
AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p pro...    29   2.8  
AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-P...    29   2.8  

>BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p
           protein.
          Length = 188

 Score =  167 bits (406), Expect = 6e-42
 Identities = 84/133 (63%), Positives = 97/133 (72%)
 Frame = +1

Query: 46  MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 225
           MGIDINHK+DRKVRRTE KSQDV               TN KFN+IIL+RLFMS+INRPP
Sbjct: 1   MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPP 60

Query: 226 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 405
           +SL R+AR  K   +     VVVGTV++D RL  VPK+TV ALHVT+ AR RIL AGGE+
Sbjct: 61  LSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEV 120

Query: 406 LTCDQLALRAPTG 444
           LT DQLALR+PTG
Sbjct: 121 LTFDQLALRSPTG 133


>AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p
           protein.
          Length = 188

 Score =  167 bits (406), Expect = 6e-42
 Identities = 84/133 (63%), Positives = 97/133 (72%)
 Frame = +1

Query: 46  MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 225
           MGIDINHK+DRKVRRTE KSQDV               TN KFN+IIL+RLFMS+INRPP
Sbjct: 1   MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPP 60

Query: 226 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 405
           +SL R+AR  K   +     VVVGTV++D RL  VPK+TV ALHVT+ AR RIL AGGE+
Sbjct: 61  LSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEV 120

Query: 406 LTCDQLALRAPTG 444
           LT DQLALR+PTG
Sbjct: 121 LTFDQLALRSPTG 133


>AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA
           protein.
          Length = 188

 Score =  167 bits (406), Expect = 6e-42
 Identities = 84/133 (63%), Positives = 97/133 (72%)
 Frame = +1

Query: 46  MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 225
           MGIDINHK+DRKVRRTE KSQDV               TN KFN+IIL+RLFMS+INRPP
Sbjct: 1   MGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPP 60

Query: 226 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 405
           +SL R+AR  K   +     VVVGTV++D RL  VPK+TV ALHVT+ AR RIL AGGE+
Sbjct: 61  LSLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEV 120

Query: 406 LTCDQLALRAPTG 444
           LT DQLALR+PTG
Sbjct: 121 LTFDQLALRSPTG 133


>M97259-1|AAA28497.1|  341|Drosophila melanogaster
           ecdysone-inducible membrane protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -2

Query: 414 TR*NLTSSSQDAGTSFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLACRLLHVACQTG 235
           T+   +SS+  AG + +S    GY   R    P  IG      S   LA  +   +C++G
Sbjct: 47  TKTKWSSSTDLAGNTPISTEEHGYYVKRTFAAPGEIGAAQKRLSPPYLAIPIAWFSCESG 106

Query: 234 QRNRRSVDTAHKQSP*DDLVE 172
           Q+N +S ++A   S    L E
Sbjct: 107 QKNCQSSNSAAINSAAQSLSE 127


>BT012464-1|AAS93735.1|  340|Drosophila melanogaster RE44872p
           protein.
          Length = 340

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -2

Query: 414 TR*NLTSSSQDAGTSFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLACRLLHVACQTG 235
           T+   +SS+  AG + +S    GY   R    P  IG      S   LA  +   +C++G
Sbjct: 46  TKTKWSSSTDLAGNTPISTEEHGYYVKRTFAAPGEIGAAQKRLSPPYLAIPIAWFSCESG 105

Query: 234 QRNRRSVDTAHKQSP*DDLVE 172
           Q+N +S ++A   S    L E
Sbjct: 106 QKNCQSSNSAAINSAAQSLSE 126


>AY069742-1|AAL39887.2|  372|Drosophila melanogaster LP07125p
           protein.
          Length = 372

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -2

Query: 414 TR*NLTSSSQDAGTSFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLACRLLHVACQTG 235
           T+   +SS+  AG + +S    GY   R    P  IG      S   LA  +   +C++G
Sbjct: 78  TKTKWSSSTDLAGNTPISTEEHGYYVKRTFAAPGEIGAAQKRLSPPYLAIPIAWFSCESG 137

Query: 234 QRNRRSVDTAHKQSP*DDLVE 172
           Q+N +S ++A   S    L E
Sbjct: 138 QKNCQSSNSAAINSAAQSLSE 158


>AE014296-2263|AAF49828.1|  341|Drosophila melanogaster CG10717-PA,
           isoform A protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -2

Query: 414 TR*NLTSSSQDAGTSFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLACRLLHVACQTG 235
           T+   +SS+  AG + +S    GY   R    P  IG      S   LA  +   +C++G
Sbjct: 47  TKTKWSSSTDLAGNTPISTEEHGYYVKRTFAAPGEIGAAQKRLSPPYLAIPIAWFSCESG 106

Query: 234 QRNRRSVDTAHKQSP*DDLVE 172
           Q+N +S ++A   S    L E
Sbjct: 107 QKNCQSSNSAAINSAAQSLSE 127


>AE014296-2262|AAN11832.1|  366|Drosophila melanogaster CG10717-PB,
           isoform B protein.
          Length = 366

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 24/81 (29%), Positives = 37/81 (45%)
 Frame = -2

Query: 414 TR*NLTSSSQDAGTSFLSNV*CGYCHFRNSVKPHIIGDCANDYSDQTLACRLLHVACQTG 235
           T+   +SS+  AG + +S    GY   R    P  IG      S   LA  +   +C++G
Sbjct: 72  TKTKWSSSTDLAGNTPISTEEHGYYVKRTFAAPGEIGAAQKRLSPPYLAIPIAWFSCESG 131

Query: 234 QRNRRSVDTAHKQSP*DDLVE 172
           Q+N +S ++A   S    L E
Sbjct: 132 QKNCQSSNSAAINSAAQSLSE 152


>AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p
           protein.
          Length = 1253

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +1

Query: 232 LSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILT 411
           L +   H+K    +G +AVV+ T SN++         VA L +  K RAR  +A     T
Sbjct: 460 LEKAEDHLKAINTDGKLAVVLPTTSNEID--NTNTEIVADLEIKPKRRARKASAKETNTT 517

Query: 412 CDQ 420
            D+
Sbjct: 518 SDK 520


>AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-PA
           protein.
          Length = 1298

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +1

Query: 232 LSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILT 411
           L +   H+K    +G +AVV+ T SN++         VA L +  K RAR  +A     T
Sbjct: 505 LEKAEDHLKAINTDGKLAVVLPTTSNEID--NTNTEIVADLEIKPKRRARKASAKETNTT 562

Query: 412 CDQ 420
            D+
Sbjct: 563 SDK 565


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,264,696
Number of Sequences: 53049
Number of extensions: 389833
Number of successful extensions: 1119
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)