Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B23
(482 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 41 6e-04
03_02_0484 + 8805053-8805538 41 6e-04
03_02_0483 - 8804021-8804485 40 8e-04
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 38 0.006
01_01_0229 - 1943473-1943922 37 0.007
01_01_0231 + 1951047-1951499 37 0.010
03_05_0543 - 25404630-25405408,25405461-25405605 36 0.013
01_01_0227 + 1933247-1933699 35 0.030
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 35 0.039
02_02_0077 - 6586638-6587165 34 0.052
01_01_0599 - 4448290-4448790 33 0.16
12_02_1174 - 26696869-26698191 32 0.28
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750... 32 0.28
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634... 31 0.37
01_05_0519 - 22897277-22897986,22898126-22898225 31 0.37
07_01_1032 - 8947594-8947769,8947885-8948601,8948973-8949049,894... 30 0.85
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 30 1.1
09_03_0127 + 12573429-12574857,12575269-12575903 29 1.5
02_05_0972 + 33198035-33198277,33198366-33198641 29 2.0
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 29 2.6
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285... 29 2.6
09_01_0140 + 2083885-2083969,2084178-2084653 28 3.4
07_03_1559 + 27727492-27728193 28 3.4
01_07_0105 - 41104655-41104851,41105818-41107150 28 3.4
08_02_0767 + 21004373-21004545,21004656-21004711,21004800-210048... 28 4.5
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 4.5
07_03_0602 + 19881998-19882217,19882303-19882496,19883719-198840... 27 6.0
06_03_0073 + 16229369-16230115,16230182-16230431,16230618-162307... 27 6.0
04_04_0746 + 27726736-27727118,27727518-27727544,27728042-277281... 27 6.0
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167... 27 7.9
11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172... 27 7.9
09_04_0041 - 14051870-14052430,14052509-14052562 27 7.9
05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429 27 7.9
>03_02_0485 - 8808139-8808618
Length = 159
Score = 40.7 bits (91), Expect = 6e-04
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Frame = +1
Query: 256 DVQHFAPEEISVKTVDGFIVI-----EANHEEKMDEHGWVSR---KFSRRYQLPEVCDVD 411
DV EE+ V+ DG I+ EEK D+ V R KF RR++LPE +
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 412 AVPSPLSSDGVLSITVPLERPQ 477
+ + + + GVL++TVP E P+
Sbjct: 128 QIKASMEN-GVLTVTVPKEEPK 148
>03_02_0484 + 8805053-8805538
Length = 161
Score = 40.7 bits (91), Expect = 6e-04
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Frame = +1
Query: 256 DVQHFAPEEISVKTVDGFIVI-----EANHEEKMDEHGWVSR---KFSRRYQLPEVCDVD 411
DV EE+ V+ DG ++ EEK D+ V R KF RR++LPE +
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 412 AVPSPLSSDGVLSITVPLERPQ 477
+ + + + GVL++TVP E P+
Sbjct: 130 QIKASMEN-GVLTVTVPKEEPK 150
>03_02_0483 - 8804021-8804485
Length = 154
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Frame = +1
Query: 256 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEVCDVD 411
DV EE+ V+ DG ++ + EEK D+ V R KF RR++LPE +
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 412 AVPSPLSSDGVLSITVPLERPQ 477
+ + + + GVL++TVP E P+
Sbjct: 123 QIKASMEN-GVLTVTVPKEEPK 143
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +1
Query: 256 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEVCDVD 411
D+ EE+ V+ +G +++ + E+K D+ V R +F RR++LPE VD
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 412 AVPSPLSSDGVLSITVP 462
V + L +GVL++TVP
Sbjct: 119 QVKAGL-ENGVLTVTVP 134
>01_01_0229 - 1943473-1943922
Length = 149
Score = 37.1 bits (82), Expect = 0.007
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +1
Query: 256 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEVCDVD 411
D+ EE+ V+ +G +++ + E+K D+ V R +F RR++LPE VD
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 412 AVPSPLSSDGVLSITVP 462
V + + +GVL++TVP
Sbjct: 118 QVKASM-ENGVLTVTVP 133
>01_01_0231 + 1951047-1951499
Length = 150
Score = 36.7 bits (81), Expect = 0.010
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +1
Query: 256 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEVCDVD 411
D+ EE+ V+ +G +++ + E+K D+ V R +F RR++LPE VD
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 412 AVPSPLSSDGVLSITVP 462
V + + +GVL++TVP
Sbjct: 119 QVKAGM-ENGVLTVTVP 134
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 36.3 bits (80), Expect = 0.013
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +1
Query: 235 SKFQLNLDVQHFAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEVCDVDA 414
+ L+LD F EEI V VD + E + + W +F + +QLP C+VD
Sbjct: 39 NSIHLSLDQLGFKREEIRV-LVDNHGHLRTRGERPVAGNRW--SRFQKDFQLPADCNVDG 95
Query: 415 VPSPLSSDGVLSITVPLERP 474
+ + ++ L+IT+P + P
Sbjct: 96 IRAKFENE-ALTITLPKKTP 114
>01_01_0227 + 1933247-1933699
Length = 150
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 316 IEANHEEKMDEHGWVSRKFSRRYQLPEVCDVDAVPSPLSSDGVLSITVPLE 468
++ ++E+ S KF RR++LP VD V + + +GVL++TVP E
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>10_08_0141 + 15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 34.7 bits (76), Expect = 0.039
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +1
Query: 256 DVQHFAPEEISVKTVDGF--IVIEANHEEKMDEHGWVSRKFSRRYQLPEVCDVDAVPSPL 429
D+Q + E I V+ V +V+ + + W +F ++ +P+ CD+ A+ + L
Sbjct: 941 DIQGYKKEHIKVQLVRSRRRLVVSGECPVAGETNRW--SRFRLQFPVPDGCDLKAIQARL 998
Query: 430 SSDGVLSITVPLERPQ 477
DGV+ +T+P +PQ
Sbjct: 999 H-DGVIRVTLPGVKPQ 1013
>02_02_0077 - 6586638-6587165
Length = 175
Score = 34.3 bits (75), Expect = 0.052
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 367 KFSRRYQLPEVCDVDAVPSPLSSDGVLSITVPLERP 474
KF RR+ LPE D+D V + DGVL++TV + P
Sbjct: 117 KFMRRFPLPESADLDGVRAEY-KDGVLTVTVDKKPP 151
>01_01_0599 - 4448290-4448790
Length = 166
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 367 KFSRRYQLPEVCDVDAVPSPLSSDGVLSITV 459
KF R++ LP+ DVD + S + DGVL++TV
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTV 147
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.9 bits (69), Expect = 0.28
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 268 FAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEVCDVDAVPSPLSSDGVL 447
F E++ V+ VD ++ A E G +F + +LP+ CD DAV + D L
Sbjct: 33 FRKEQVRVQ-VDNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRARF-DDHKL 90
Query: 448 SITVPL 465
IT+PL
Sbjct: 91 IITLPL 96
>03_06_0443 +
33973229-33973311,33973422-33973510,33974873-33975024,
33975463-33975579,33975729-33975776,33976169-33976312,
33976715-33976858
Length = 258
Score = 31.9 bits (69), Expect = 0.28
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = -3
Query: 339 LLFMISLNDDKSVNGFHGDLLWSEVLHIKIELKLALVGFDGRARVVEEVRELFPRPIELF 160
LL + +++DK + G G S+ LHI IE + D R R +EV E +P+
Sbjct: 156 LLVALLISEDK-LRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPV--- 211
Query: 159 RRLRTDET*DFFGRQSEGELLVV 91
DE+ DF+ RQ EL ++
Sbjct: 212 -----DESQDFYKRQQLRELAML 229
>12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403,
17466161-17466346
Length = 1831
Score = 31.5 bits (68), Expect = 0.37
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 206 SWRRFESCFQGP*NFLDGCGLTRLRTSSGVRARANCLLFRSLGRSISRRYG 54
SW+ S P NF+ L ++T++G R NCLLF S+ R G
Sbjct: 1360 SWKMLGSAL--PDNFMSSINLRWVKTTAGYRHPKNCLLFGPACSSLHRDDG 1408
>01_05_0519 - 22897277-22897986,22898126-22898225
Length = 269
Score = 31.5 bits (68), Expect = 0.37
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 241 FQLNLDVQHFAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEVCDVDAVP 420
+ L ++V F EE+ V V A +HG + + ++ +QLP C++DA+
Sbjct: 26 YLLRVNVPEFKKEELQVH------VDPAGRLTVRGQHGGL--RLNKVFQLPPTCNLDAIT 77
Query: 421 SPLSSDGVLSITVPLERPQT 480
L + VL +TVP ++P T
Sbjct: 78 GRLEA-SVLVLTVP-KKPAT 95
>07_01_1032 -
8947594-8947769,8947885-8948601,8948973-8949049,
8949264-8949655,8949746-8950002,8950234-8950921
Length = 768
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 211 GSTIKADKSKFQLN-LDVQHFAPEEISVKTVDGFIVIEA 324
G +K + ++F N + +Q F E ISV VDGF+ I A
Sbjct: 407 GELVKWNATRFGTNCMFLQSFLKEAISVHAVDGFLYIHA 445
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 295 TVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEVCDVDAVPSPLSS 435
++DG + + + E+ E G S+KFS+ + E D PS LSS
Sbjct: 51 SMDGVLYCKTHFEQLFKETGSFSKKFSQGGKSSEKSDQGRAPSKLSS 97
>09_03_0127 + 12573429-12574857,12575269-12575903
Length = 687
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -3
Query: 399 DFRQLVSP*KLSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEVLHIKIELKLALVGFD 220
+FR+ + +RHP+VL L F ++ + V F G +++LH IE + +
Sbjct: 430 EFRRRMERVGKARHPAVLPPLAFYCAMQEKLVVYEFLGHGSLAKLLHGSIESSQVALDWP 489
Query: 219 GRARVVEEVRE 187
R + +V +
Sbjct: 490 ARLHIASKVAD 500
>02_05_0972 + 33198035-33198277,33198366-33198641
Length = 172
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 364 RKFSRRYQLPEVCDVDAVPSPLSSDGVLSITVPLERP 474
R F+R+++LPE D + S +GVL++TV P
Sbjct: 124 RAFARKFRLPEDADTGGI-SARCENGVLTVTVKKRPP 159
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +1
Query: 163 KFYGPW----KQLSNLLHDSGSTIKADKSKFQLNLD-VQHFAPEEISVK 294
+FY PW K+L+ +L ++ +T+K+DK +D + P E V+
Sbjct: 408 EFYAPWCGHCKKLAPILDEAATTLKSDKDVVIAKMDATANDVPSEFDVQ 456
>05_05_0237 -
23526613-23527178,23527979-23528066,23528384-23528527,
23528674-23528790,23528860-23528970,23530911-23531062,
23531362-23531450,23531664-23531761
Length = 454
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = -3
Query: 318 NDDKSVNGFHGDLLWSEVLHIKIELKLALVGFDGRARVVEEVRELFPRPIELFRRLRTDE 139
N ++ + G G + LHI IE +L D R +E+ E +P+ DE
Sbjct: 188 NKEEQLKGRAGYEHLDDPLHILIEAELPANVIDARLAKAQEILEELLKPV--------DE 239
Query: 138 T*DFFGRQSEGELLVV*EP 82
+ D++ RQ EL ++ P
Sbjct: 240 SQDYYKRQQLRELALLNSP 258
>09_01_0140 + 2083885-2083969,2084178-2084653
Length = 186
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 108 PRSDARRSPKSRQSATV*KV-LWALETALEPPPRLWLDHQS 227
PR P Q+AT ++ LW+ A PPPRL LD S
Sbjct: 16 PRGGGAGGPAGEQAATSFQIFLWSF--ACTPPPRLALDSPS 54
>07_03_1559 + 27727492-27728193
Length = 233
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 15 LCSGPPKRKDVPVTVSPRDGTP*APKQQAIRPRSDARR 128
LCS P RK V G P +P+ + I+ R+ RR
Sbjct: 171 LCSTPELRKHYEQLVGAARGRPWSPRLETIKERNGRRR 208
>01_07_0105 - 41104655-41104851,41105818-41107150
Length = 509
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +1
Query: 124 EEVLSLVSPQPSKKFYGPWKQLSNLLHDSGSTIKADKSKFQLNLDVQHFAPEEISVKTVD 303
EEV L P SK G + ++ + D K + S N++ + EEI V+ +
Sbjct: 331 EEVAQLEQPSSSKSNNGEMEAVAGV--DQAEDAKKETS----NIEAINVEQEEIKVEEEE 384
Query: 304 GFIVIEANHEEKMDEHGWVSR 366
I++ EE+ ++ +SR
Sbjct: 385 EKIIVSQETEEEEEKSAVISR 405
>08_02_0767 +
21004373-21004545,21004656-21004711,21004800-21004882,
21004942-21005112,21005806-21005997
Length = 224
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 311 SSLRLIMKRRWMSTDGCLESFHGDTSCLKSVMSTLS 418
+S RL+++R W CL H SC K T++
Sbjct: 51 TSRRLLIRRLWQQRPPCLRPIHCSLSCDKHPGETIA 86
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 296 PLTDLSSLRLIMKRRWMSTDGC 361
PL+DL S RL +R + S DGC
Sbjct: 327 PLSDLDSQRLFFRRIFGSDDGC 348
>07_03_0602 +
19881998-19882217,19882303-19882496,19883719-19884039,
19885016-19885244,19885554-19885653,19886413-19886539,
19886603-19886780,19886859-19886917,19887082-19887568,
19887682-19887836,19887930-19888100,19888181-19888270,
19888714-19888872,19888940-19889223,19889435-19889498
Length = 945
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 277 EEISVKTVDG-FIVIEANHEEKMDEHGWVS---RKFSRRYQLPEVCDVDAVPSPLSSDGV 444
EEI V+ D ++VI ++ D G R F+R+++LP + D D + S + GV
Sbjct: 78 EEIRVEVEDAMYLVIRTELDDGGDGDGGGGGGRRSFARKFRLPAMVDADGI-SAEYTHGV 136
Query: 445 L 447
L
Sbjct: 137 L 137
>06_03_0073 +
16229369-16230115,16230182-16230431,16230618-16230728,
16230768-16231153
Length = 497
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -1
Query: 164 FLDGCGLTRLRTSSGVRARANCLLFRSLGRSISRRYGNRDIFTLW 30
FL+ C + ++ S R LF LGR+ Y NR W
Sbjct: 107 FLETCSMYTIKGVSPDAVRLRLFLFSLLGRAKQWFYANRAAINTW 151
>04_04_0746 +
27726736-27727118,27727518-27727544,27728042-27728126,
27729252-27729809
Length = 350
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 451 LTTLRPKTAGTGQRRHHRLQATGISVKTFETPIRAHPSS 335
+ +RPK G+ +R HH L T T I +P S
Sbjct: 200 MAPIRPKPLGSPKRCHHGLAGVKCGAATTRTQIGYNPQS 238
>12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,
1676103-1676206,1676321-1676479,1676768-1676894,
1677569-1677736,1677890-1678000,1678090-1678243,
1678409-1678744,1678854-1679038,1679141-1679239,
1679376-1679639,1679776-1679952,1680351-1680644,
1680753-1680920,1681574-1681918,1682002-1682171,
1682272-1682422,1683296-1683365,1683456-1683640,
1683999-1684092,1684195-1684313,1684658-1684717,
1684844-1684930,1685631-1685717,1685905-1686013,
1686105-1686183,1686350-1686437,1686611-1686675,
1687570-1687722,1688514-1688620,1688702-1688784,
1688926-1689016,1689095-1689231,1689612-1689701,
1689795-1689962,1690366-1690560
Length = 1809
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -3
Query: 369 LSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEV 265
LS + +V++ ++F +DDK + +G+ LW ++
Sbjct: 1404 LSGYNAVVLPVIFASRFDDDKDIGALYGE-LWEDI 1437
>11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,
1721996-1722099,1722214-1722372,1722668-1722794,
1723469-1723636,1723789-1723899,1723989-1724142,
1724308-1724643,1724753-1724937,1725040-1725138,
1725275-1725538,1725674-1725850,1726249-1726542,
1726649-1726816,1727473-1727817,1727901-1728070,
1728171-1728321,1729193-1729262,1729353-1729537,
1729896-1729989,1730094-1730212,1730558-1730617,
1730744-1730830,1732348-1732434,1732622-1732730,
1732822-1732900,1733067-1733154,1733328-1733392,
1734287-1734439,1735231-1735337,1735419-1735501,
1735643-1735733,1735812-1735948,1736118-1736207,
1736301-1736468,1736875-1737057
Length = 1805
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -3
Query: 369 LSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEV 265
LS + +V++ ++F +DDK + +G+ LW ++
Sbjct: 1400 LSGYNAVVLPVIFASRFDDDKDIGALYGE-LWEDI 1433
>09_04_0041 - 14051870-14052430,14052509-14052562
Length = 204
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 27 PPKRKDVPVTVSPRDGTP*APKQQAIRPRSDARRSPKSRQSATV*KVLWALETALEPPPR 206
PPK KD + P AP + RPR + PK + V K + A PP+
Sbjct: 95 PPKPKDAAAAAAAPAPAPAAPAASSPRPRGRPPK-PKDPLAEAVAKATSGMPRARGRPPK 153
>05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429
Length = 429
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 60 SPRDGTP*AP-KQQAIRPRSDARRSPK---SRQSATV*KVLWALETALEPPP 203
SP +P P +A +P + +RR K S + T+ + LW + + L PPP
Sbjct: 35 SPEGSSPRDPDSDEAEQPDTPSRRGVKDDISELTETLTRRLWGVASFLAPPP 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,841,754
Number of Sequences: 37544
Number of extensions: 283008
Number of successful extensions: 1070
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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