Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_B23
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.56 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.9  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 447 QHSVRRQRGRDSVDITDFRQLVSP 376
           +H  R   GRDSVD  DF + + P
Sbjct: 299 RHQKRYFFGRDSVDHVDFDEFLPP 322


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 455  VIDNTPSEDSGDGTASTSQTSGN 387
            ++ N  S+D GD T       GN
Sbjct: 1370 MLSNLQSQDGGDYTCQVENAQGN 1392


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 455  VIDNTPSEDSGDGTASTSQTSGN 387
            ++ N  S+D GD T       GN
Sbjct: 1366 MLSNLQSQDGGDYTCQVENAQGN 1388


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 310 IVIEANHEEKMDEHGWVSRKFSRRYQL 390
           +V   NH+ + D    ++ K+S+RY++
Sbjct: 302 LVFVDNHDTQRDNPQILTYKYSKRYKM 328


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 267 VLHIKIELKLALVGFDGRARVVEEVRELFPRPIELF 160
           V+ ++ ELK   V F    R+ +E  E++P+   L+
Sbjct: 10  VVGVQAELKQINVIFRHGDRIPDEKNEMYPKDPYLY 45


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -1

Query: 383 YLRENFRDTHPCSSIFSS*LASMTINPSTVFTEISSGAKC 264
           YL E+ R   PC+S +        ++P++         KC
Sbjct: 71  YLAESSRSIDPCASKYCGIGKECELSPNSTIAVCVCMRKC 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,551
Number of Sequences: 438
Number of extensions: 3029
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)