Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B22
(372 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 176 4e-45
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 176 5e-45
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 174 2e-44
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 174 2e-44
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 174 2e-44
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 174 2e-44
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 174 2e-44
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 174 2e-44
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 174 2e-44
12_02_1282 + 27528159-27529148,27529549-27529614 173 5e-44
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 77 3e-15
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 54 4e-08
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 52 1e-07
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 50 6e-07
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 46 9e-06
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 42 2e-04
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 33 0.095
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136... 29 0.88
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 29 1.5
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 29 1.5
06_03_0013 - 15393830-15394060,15394238-15394672 28 2.0
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 28 2.7
12_01_0843 + 7891622-7892524 27 3.6
02_05_0477 - 29339649-29340253,29340880-29341492 27 3.6
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 27 4.7
04_04_0692 - 27307349-27307728,27308381-27308546 27 6.2
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 26 8.2
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 26 8.2
02_02_0088 - 6655493-6655601,6656057-6656259,6656382-6656594,665... 26 8.2
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 176 bits (429), Expect = 4e-45
Identities = 77/91 (84%), Positives = 83/91 (91%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 278 SKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 370
+KRGIL LKYPIEHGIV NWDDMEKIWHHTF
Sbjct: 61 AKRGILTLKYPIEHGIVNNWDDMEKIWHHTF 91
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 176 bits (428), Expect = 5e-45
Identities = 77/91 (84%), Positives = 83/91 (91%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 278 SKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 370
SKRGIL LKYPIEHGIV NWDDMEKIWHHTF
Sbjct: 61 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTF 91
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 174 bits (424), Expect = 2e-44
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILRLKYPIEHGIVTNWDDMEKIWHHTF 370
GIL LKYPIEHGIV+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTF 92
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 174 bits (424), Expect = 2e-44
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILRLKYPIEHGIVTNWDDMEKIWHHTF 370
GIL LKYPIEHGIV+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTF 92
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 174 bits (424), Expect = 2e-44
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILRLKYPIEHGIVTNWDDMEKIWHHTF 370
GIL LKYPIEHGIV+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTF 92
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 174 bits (424), Expect = 2e-44
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILRLKYPIEHGIVTNWDDMEKIWHHTF 370
GIL LKYPIEHGIV+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTF 92
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 174 bits (424), Expect = 2e-44
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILRLKYPIEHGIVTNWDDMEKIWHHTF 370
GIL LKYPIEHGIV+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTF 92
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 174 bits (424), Expect = 2e-44
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILRLKYPIEHGIVTNWDDMEKIWHHTF 370
GIL LKYPIEHGIV+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTF 92
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 174 bits (423), Expect = 2e-44
Identities = 77/88 (87%), Positives = 81/88 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILRLKYPIEHGIVTNWDDMEKIWHHTF 370
GIL LKYPIEHGIV NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTF 92
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 173 bits (420), Expect = 5e-44
Identities = 76/88 (86%), Positives = 81/88 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILRLKYPIEHGIVTNWDDMEKIWHHTF 370
GIL LKYPIEHGIV NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTF 92
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 77.4 bits (182), Expect = 3e-15
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 295
+V DNG+G K GFAG++ P +VFP +VGRP R++ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 296 RLKYPIEHGIVTNWDDMEKIWHHTF 370
+ YP+ +GIV +WDDM IW H F
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDHAF 91
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 54.0 bits (124), Expect = 4e-08
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 18/98 (18%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH---QGVMVG------------MGQKD 253
A+V+DNG+G K GF+G+ P P++V Q M M D
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLD 67
Query: 254 SYVGDEAQS---KRGILRLKYPIEHGIVTNWDDMEKIW 358
++GDEA S G+ K+PI HG V +WD ME+ W
Sbjct: 68 FFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFW 105
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 202
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
Score = 41.1 bits (92), Expect = 3e-04
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 257 YVGDEAQSKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 370
YVG E + +R + + P++ G VT+WD ++ IW+H F
Sbjct: 120 YVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAF 157
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 50.0 bits (114), Expect = 6e-07
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPRH---QGVMVG------MGQK 250
A+V+DNG+G K GFAG+ P + P++V G+ R +G + M
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
Query: 251 DSYVGDEAQSKR---GILRLKYPIEHGIVTNWDDMEKIW 358
D ++G++A ++ L YPI +G V NWD ME+ W
Sbjct: 68 DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFW 106
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 46.0 bits (104), Expect = 9e-06
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR---GI 292
+V+DNG G+ KAGF GD P AV P+ + +P G K V D+ Q++
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP--------PGSKKWLVADQLQAQDVDVTG 59
Query: 293 LRLKYPIEHGIVTNWDDMEKIW 358
+ L+ PI+ G + N + ++W
Sbjct: 60 MTLRRPIDRGYLINQEVQREVW 81
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG---VMVGMGQKDSYVGDEAQSKRGI 292
+V+DNG+ + G+AG+ PR F +IV RPRH+ + +G D + R
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHRSSGETVTVVGDTDPALMKYFDCTRSA 81
Query: 293 LRLKYPIEHGIVTNWDDMEKI 355
+R P + +V ++ ME I
Sbjct: 82 IR--SPFDDDVVYQFEYMEYI 100
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 32.7 bits (71), Expect = 0.095
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 295
A+VVD GS + KAG A D +P V PS + + +D +GD A +
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAV----VE 48
Query: 296 RLKYPIEHGIVTNWDDMEKIWHH 364
+ P+ G V +WD ME + ++
Sbjct: 49 EVVQPVVRGFVKDWDAMEDLLNY 71
>11_06_0102 +
20112731-20112928,20113314-20113514,20113606-20113695,
20114269-20114457,20115375-20115387,20115824-20115990,
20117334-20117522,20118940-20119053,20120912-20121010,
20122368-20122490,20122579-20122701,20123179-20123277,
20124786-20124842,20125136-20125182,20125296-20125439,
20125540-20125717,20126318-20126398,20126480-20126563,
20126624-20126629
Length = 733
Score = 29.5 bits (63), Expect = 0.88
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = -3
Query: 367 GVMPDLLHIVPVGDDAVFDG 308
G++ DL+++ VGDDA++DG
Sbjct: 405 GLIRDLIYVGAVGDDAIYDG 424
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 28.7 bits (61), Expect = 1.5
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 278 SKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 370
++R + + P++ G +WD ++ IW+H F
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF 193
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 28.7 bits (61), Expect = 1.5
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 278 SKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 370
++R + + P++ G +WD ++ IW+H F
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF 94
>06_03_0013 - 15393830-15394060,15394238-15394672
Length = 221
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 207 GDLVTRASWSAWVRRTPT*VMRHRAR 284
G + R +W+AW RRTP V H R
Sbjct: 163 GTVAKRRAWAAWTRRTPN-VWNHDYR 187
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 27.9 bits (59), Expect = 2.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 308 PIEHGIVTNWDDMEKIWHHTF 370
P++ G +WD ++ IW+H F
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAF 112
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAV 190
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 205
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 128 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 259
++N S K GF + V +++G P H G + G+ K S+
Sbjct: 322 IENLSSSQKKGFFKPKREKDVLSTVLGTPEHGGRVRGVSSKMSW 365
>04_04_0692 - 27307349-27307728,27308381-27308546
Length = 181
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 204 TIEGNTARGASSPAKPALHIPDPLSTTNAATSSS 103
T+ G+ A G + AKP+ DP +TT TSS+
Sbjct: 123 TLSGSAA-GGTRLAKPSSSDADPTTTTTTRTSSA 155
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFAGDDAP 181
+++VD GSG CK G++ AP
Sbjct: 141 SIIVDGGSGYCKYGWSKYAAP 161
>03_01_0085 +
690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 26.2 bits (55), Expect = 8.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 308 PIEHGIVTNWDDMEKIWHH 364
P HG+V++ + EK+WH+
Sbjct: 739 PSSHGVVSSDMEPEKVWHY 757
>02_02_0088 -
6655493-6655601,6656057-6656259,6656382-6656594,
6656683-6656792,6656878-6656981,6657076-6657245,
6657337-6657501,6657584-6657702,6657853-6657940,
6658035-6658140,6658235-6658323,6658461-6658604,
6658715-6658807,6658906-6658972,6659116-6659228,
6659306-6659401,6659524-6659724
Length = 729
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +3
Query: 57 YLFNRTI*LKTNSQCATRKLPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWS 236
Y N + ++ N Q LP WS ++ P+C V T+ P +V R +W
Sbjct: 390 YHMNTAVKVRFNGQ--QYNLPAWSISILPDCKTAVFNTATVKEPTLMPKMNPVV-RFAWQ 446
Query: 237 AWVRRT 254
++ T
Sbjct: 447 SYSEDT 452
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,797,508
Number of Sequences: 37544
Number of extensions: 235397
Number of successful extensions: 778
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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