Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_B21
         (442 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    26   0.68 
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       26   0.68 
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       26   0.68 
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       26   0.68 
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   6.4  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           22   8.4  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.8 bits (54), Expect = 0.68
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 113 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 241
           FDD + + L++  EDS  D TLI + L D + ++  S  + DGD+
Sbjct: 334 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 377


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 0.68
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 113 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 241
           FDD + + L++  EDS  D TLI + L D + ++  S  + DGD+
Sbjct: 104 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 147


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 25.8 bits (54), Expect = 0.68
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 113 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 241
           FDD + + L++  EDS  D TLI + L D + ++  S  + DGD+
Sbjct: 110 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 153


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 0.68
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 113 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 241
           FDD + + L++  EDS  D TLI + L D + ++  S  + DGD+
Sbjct: 104 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 147


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +2

Query: 155 SYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGDN*CVAALTPSTHTRAFVL 313
           SY+    I+ ++   + LW +     GD  A GG    +  LT + +   F++
Sbjct: 145 SYRQFARILSIILIGVLLWITAFVIIGDTAAPGGQLFQLVVLTVAANFGGFLI 197


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 68  ILNSPDKACQLAKQAFDDAIAELDTLN 148
           +L   D+ C+   Q  D  + E+DT+N
Sbjct: 156 VLRDLDEGCRSRVQYLDLKLNEIDTVN 182


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,204
Number of Sequences: 2352
Number of extensions: 5558
Number of successful extensions: 55
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)