Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B18
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 93 4e-20
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 93 8e-20
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 92 1e-19
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 89 7e-19
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 85 2e-17
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 79 8e-16
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 76 7e-15
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 67 4e-12
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 29 1.1
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 1.4
02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116... 28 1.9
12_02_0329 + 17585046-17585561 26 7.6
08_02_1528 + 27666356-27667081 26 7.6
06_02_0307 + 14122217-14122459 26 7.6
06_01_0929 - 7171395-7171676,7172019-7172219,7172438-7172524,717... 26 7.6
03_05_0521 + 25160245-25160883 26 7.6
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 93.5 bits (222), Expect = 4e-20
Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE-- 288
QAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E
Sbjct: 239 QAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESR 298
Query: 289 GSERKQQMAKEYRVKVEKEL 348
G+E + + KEYR K+E EL
Sbjct: 299 GNEDRCTLIKEYRGKIETEL 318
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 92.7 bits (220), Expect = 8e-20
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE-- 288
QAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E
Sbjct: 21 QAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESR 80
Query: 289 GSERKQQMAKEYRVKVEKEL 348
G+E + + K+YR K+E EL
Sbjct: 81 GNEDRVTLIKDYRGKIETEL 100
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 91.9 bits (218), Expect = 1e-19
Identities = 48/80 (60%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE-- 288
QAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E
Sbjct: 15 QAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGR 74
Query: 289 GSERKQQMAKEYRVKVEKEL 348
G+E + KEYR K+E EL
Sbjct: 75 GNEEHVTLIKEYRGKIEAEL 94
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 89.4 bits (212), Expect = 7e-19
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE-- 288
QAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E
Sbjct: 20 QAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESR 79
Query: 289 GSERKQQMAKEYRVKVEKEL 348
G+E KEYR ++E EL
Sbjct: 80 GNEAYVASIKEYRSRIETEL 99
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 85.0 bits (201), Expect = 2e-17
Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKT 285
QAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK
Sbjct: 22 QAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKE 81
Query: 286 E--GSERKQQMAKEYRVKVEKEL 348
E G+ A+ YR +VE EL
Sbjct: 82 EGRGAAGHAAAARSYRARVEAEL 104
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 79.4 bits (187), Expect = 8e-16
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSER 300
QAERYDDM MK + V++S EER L SV +K +GARR+SWR++ S+EQK ++
Sbjct: 16 QAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRILESLEQKVTAGDQ 75
Query: 301 KQQMAKEYRVKVEKELR 351
Y+ KVE ELR
Sbjct: 76 PGVTINGYKKKVEDELR 92
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 76.2 bits (179), Expect = 7e-15
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +1
Query: 175 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 348
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 66.9 bits (156), Expect = 4e-12
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +1
Query: 142 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 315
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 316 KEYRVKVEKEL 348
EYR KVE E+
Sbjct: 61 AEYRRKVEAEM 71
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 144 GGRDEGSDGNRRRAQQ-RRKKPSFRCL*KCGRRPTVIM 254
G E +DG RRR++Q RR++P R + G RP++ M
Sbjct: 91 GSAAEAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 299 LSDPSVFCSIEEMTRHDDRRAPTTFL*ATERR 204
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>02_01_0167 -
1159231-1159263,1159348-1159419,1159957-1160052,
1160248-1160358,1160768-1160800,1160963-1161076
Length = 152
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 197 KETFFPLLIKMWSAPDGHH-GESFPLLNRKPKGRKENNRWQ 316
+E PLL+++++ GHH E F + ++PK + W+
Sbjct: 36 REKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWK 76
>12_02_0329 + 17585046-17585561
Length = 171
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 144 GGRDEGSDGNRRRAQQRRKKPS 209
GG+ G DG RR ++RR++ S
Sbjct: 139 GGKGGGGDGRWRRGKERRREQS 160
>08_02_1528 + 27666356-27667081
Length = 241
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 154 MKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE-GSERKQQMAKEYRV 330
+ E E + + +LLS K + + S W ++S QKT + +Q A E+ +
Sbjct: 158 LAEAREVAISMLESSSHLLS---KKITTSNSSKWSLVSKAFQKTRLACQEEQLQALEFAI 214
>06_02_0307 + 14122217-14122459
Length = 80
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 141 HGGRDEGSDGNRRRAQQRR 197
HG DE DG+ RR++QRR
Sbjct: 62 HGIDDEDCDGDGRRSRQRR 80
>06_01_0929 -
7171395-7171676,7172019-7172219,7172438-7172524,
7172973-7173023,7173883-7173987,7174074-7174185,
7174284-7174366,7174434-7174557,7174822-7174973
Length = 398
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 193 EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVK 333
+ERN + +Y N +RSS R + K E + KE +VK
Sbjct: 311 KERNEIHASYTNNSPLKRSSSRSKAKSPSKFSKGEEENSQRKEKKVK 357
>03_05_0521 + 25160245-25160883
Length = 212
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 147 GRDEGSDGNRRRAQQRRKKP 206
GR G DG R R ++RR+ P
Sbjct: 99 GRGGGGDGGRSRGRERRRLP 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,493,837
Number of Sequences: 37544
Number of extensions: 179646
Number of successful extensions: 592
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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