Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B18
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 146 5e-36
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 146 5e-36
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 144 2e-35
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 144 2e-35
AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical ... 29 0.72
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 29 1.3
Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 28 2.2
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 27 3.9
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 27 3.9
AF022980-4|AAG24191.1| 335|Caenorhabditis elegans Serpentine re... 27 3.9
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 27 5.1
Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical p... 26 8.9
Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical pr... 26 8.9
AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical ... 26 8.9
AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA bind... 26 8.9
AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical... 26 8.9
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 146 bits (353), Expect = 5e-36
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSER 300
QAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+
Sbjct: 17 QAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEK 76
Query: 301 KQQMAKEYRVKVEKELRE 354
KQQMAKEYR KVEKELR+
Sbjct: 77 KQQMAKEYREKVEKELRD 94
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 146 bits (353), Expect = 5e-36
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSER 300
QAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+
Sbjct: 17 QAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEK 76
Query: 301 KQQMAKEYRVKVEKELRE 354
KQQMAKEYR KVEKELR+
Sbjct: 77 KQQMAKEYREKVEKELRD 94
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 144 bits (348), Expect = 2e-35
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSER 300
QAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+
Sbjct: 17 QAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEK 76
Query: 301 KQQMAKEYRVKVEKELRE 354
KQQ+AKEYRVKVE+EL +
Sbjct: 77 KQQLAKEYRVKVEQELND 94
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 144 bits (348), Expect = 2e-35
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = +1
Query: 121 QAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSER 300
QAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+
Sbjct: 17 QAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEK 76
Query: 301 KQQMAKEYRVKVEKELRE 354
KQQ+AKEYRVKVE+EL +
Sbjct: 77 KQQLAKEYRVKVEQELND 94
>AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical
protein F57B10.9 protein.
Length = 476
Score = 29.5 bits (63), Expect = 0.72
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Frame = +1
Query: 157 KEVTETGVELSNEERNLLSVAYKN--VVGARRSSW-------RVISSIEQKTE 288
KE E ELS EE+N +S N + G ++ +W RVIS +E E
Sbjct: 237 KEQAEPSTELSKEEKNRISTTISNFLIKGGQKIAWGVETTTVRVISRVEDNGE 289
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 169 ETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVE 339
+ VELSN+ N + Y V + ++ +S E+KT +E + + EY VK E
Sbjct: 97 DVDVELSNDVSNENPIVYYQKVASSTTNPVYNNSSEEKTHSAENQDNI--EYGVKTE 151
>Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical
protein ZK1128.2b protein.
Length = 464
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 223 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 321
KNV+GAR+ +W+ I+ T+G E+ ++A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical
protein F20D12.2 protein.
Length = 1116
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +1
Query: 274 EQKTEGSERKQQMAKEYRVKVEKELRE 354
E+K + E+++ +AKE +KVEKE+ E
Sbjct: 757 EKKLKRIEQEKNIAKELVLKVEKEISE 783
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 27.1 bits (57), Expect = 3.9
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 127 ERYDDMAAAMKEVTETGVELSNE-ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERK 303
E+ + A KE E +L + ++ A K+ + A++ R+ ++K E ERK
Sbjct: 953 EKALEQRKAKKEEAERLKKLEEKLKKEKEKQAEKDRIEAKKFEERMKKE-QEKQEEKERK 1011
Query: 304 QQMAKEYRVKVEKELRE 354
++ +E + + E+E+RE
Sbjct: 1012 EREKREEKERKEREIRE 1028
>AF022980-4|AAG24191.1| 335|Caenorhabditis elegans Serpentine
receptor, class j protein50 protein.
Length = 335
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 348 ELLFYFNPIFFCHLLFSFRPF 286
++++YF P FC L F PF
Sbjct: 4 DIIYYFTPRVFCALTFLVNPF 24
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
protein K07G5.3 protein.
Length = 1202
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 181 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKE 345
EL E+R AY++ + +RR S +++ +K +R+Q+ ++Y V +E
Sbjct: 606 ELREEDRAQKRFAYRSAIDSRRISALQFANLARK-RVMDRRQRKERKYEEIVREE 659
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 166 TETGVELSNEERNLLSVA 219
TE G ELSN ERN + VA
Sbjct: 119 TEDGAELSNRERNRMLVA 136
>Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 165 DGNRRRAQQRRKKPSF 212
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 165 DGNRRRAQQRRKKPSF 212
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 165 DGNRRRAQQRRKKPSF 212
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA binding
protein CFI-1 protein.
Length = 467
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 165 DGNRRRAQQRRKKPSF 212
DGNRR A RR PSF
Sbjct: 286 DGNRREAPGRRTAPSF 301
>AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical
protein F25E5.2 protein.
Length = 338
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 314 AICCFLSDPSVFCSIEEMTRHD 249
AICC+L +PS+F + + D
Sbjct: 125 AICCYLHNPSLFTAANKTISQD 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,911,823
Number of Sequences: 27780
Number of extensions: 147031
Number of successful extensions: 499
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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