Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B13
(237 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 77 2e-15
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255... 73 4e-14
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 66 4e-12
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 57 2e-09
09_04_0282 - 16367886-16368587,16369209-16369345,16369764-163698... 30 0.30
08_02_0902 - 22408895-22409620,22410190-22410326,22410550-224106... 28 1.2
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 27 2.1
12_01_0135 + 1042889-1044255,1045368-1045809 27 2.1
11_01_0133 + 1121392-1122731,1123417-1123858 27 2.1
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 27 2.1
04_03_0554 - 17075142-17075159,17075788-17076591,17076619-170767... 27 2.1
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 27 2.1
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 27 2.8
02_05_0728 - 31267653-31267838,31268281-31268627,31268732-312688... 27 2.8
05_03_0238 - 10783451-10783735,10784686-10785762 26 3.7
11_06_0550 + 24879074-24881290 26 4.9
10_05_0119 + 9351951-9352047,9352336-9352361,9353555-9353791,935... 26 4.9
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 26 4.9
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 26 4.9
04_04_0296 + 24216284-24216428,24216631-24216745,24217321-242174... 26 4.9
11_06_0033 - 19437746-19437916,19438063-19438145,19438266-194383... 25 6.5
09_01_0040 + 744733-745269 25 6.5
07_01_0346 - 2501825-2501908,2502143-2502244,2502623-2502646,250... 25 6.5
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713 25 6.5
07_03_0938 + 22754244-22755569 25 8.6
06_03_0434 + 20725996-20726026,20726300-20726947,20727168-207272... 25 8.6
05_06_0039 + 25113409-25113522,25113827-25113915,25114013-251141... 25 8.6
01_06_0250 + 27876358-27879261 25 8.6
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 77.4 bits (182), Expect = 2e-15
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +3
Query: 9 LASLPPNVRKRIRALRTLQKQFVDIEAKFYSEVHALECKYEKLYKPLFEKRAEIVNGIYE 188
L SL P VRKR+ LR +Q Q D+EAKF+ E ALE KY+K+Y+PL+ KR EIVNG+ E
Sbjct: 50 LESLEPKVRKRVEVLREIQSQHDDLEAKFFEERAALEAKYQKMYEPLYSKRYEIVNGVVE 109
>06_01_0356 +
2557127-2557193,2557272-2557315,2557433-2557528,
2559259-2559351,2559450-2559540,2559617-2559678,
2559754-2559938,2560022-2560199,2560293-2560336,
2560440-2560635,2560728-2560745,2560955-2561005
Length = 374
Score = 72.5 bits (170), Expect = 4e-14
Identities = 34/60 (56%), Positives = 43/60 (71%)
Frame = +3
Query: 9 LASLPPNVRKRIRALRTLQKQFVDIEAKFYSEVHALECKYEKLYKPLFEKRAEIVNGIYE 188
L +L PNVRKR+ LR +Q Q +IE KF+ E ALE KY+KLY+PL+ KR IVNG+ E
Sbjct: 51 LEALSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKLYEPLYTKRYNIVNGVVE 110
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 66.1 bits (154), Expect = 4e-12
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +3
Query: 9 LASLPPNVRKRIRALRTLQKQFVDIEAKFYSEVHALECKYEKLYKPLFEKRAEIVNGIYE 188
L SL P VRKR+ L +Q Q ++EAKF E ALE Y+KLY PL+ KR+EIV+G+ E
Sbjct: 33 LESLAPVVRKRVDVLIEIQSQHDELEAKFLEEKAALEANYQKLYGPLYSKRSEIVSGVLE 92
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 57.2 bits (132), Expect = 2e-09
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +3
Query: 9 LASLPPNVRKRIRALRTLQKQFVDIEAKFYSEVHALECKYEKLYKPLFEK 158
L SL P+VRKR+ L +Q Q ++E KF+ E ALE KY+KLY PL+ K
Sbjct: 157 LESLAPSVRKRVDVLMEIQSQHDELEVKFFEEKAALEAKYQKLYGPLYSK 206
>09_04_0282 -
16367886-16368587,16369209-16369345,16369764-16369899,
16370021-16370422
Length = 458
Score = 29.9 bits (64), Expect = 0.30
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 226 SSLQGFRHSSSVGSYMPFTISARFSNNGLYSFSYLHSRA*T 104
SS F SS G+ P +S S + LY+F+Y RA T
Sbjct: 41 SSRMSFTSLSSSGTLSPEDLSLTLSGSNLYAFTYAELRAAT 81
>08_02_0902 -
22408895-22409620,22410190-22410326,22410550-22410685,
22410787-22411224
Length = 478
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 199 SSVGSYMPFTISARFSNNGLYSFSYLHSRA*T 104
SS G+ P +S S + LY+F+Y RA T
Sbjct: 62 SSTGTLTPEDLSLTLSGSNLYAFTYAEMRAVT 93
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 9 LASLPPNV-RKRIRALRTLQKQFVDIEAKFYSEVHALECKYEKL 137
LA L V RK +RAL T +K+ +D AK + L CK +++
Sbjct: 826 LARLQRGVARKALRALCTRRKKSLDRIAKLEKDRDYLRCKLDRM 869
>12_01_0135 + 1042889-1044255,1045368-1045809
Length = 602
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 200 FLCWFIYAVHYFSALF 153
FL F+ A+HY+SALF
Sbjct: 475 FLARFVEAIHYYSALF 490
>11_01_0133 + 1121392-1122731,1123417-1123858
Length = 593
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 200 FLCWFIYAVHYFSALF 153
FL F+ A+HY+SALF
Sbjct: 466 FLARFVEAIHYYSALF 481
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 9 LASLPPNV-RKRIRALRTLQKQFVDIEAKFYSEVHALECKYEKL 137
LA L V RK +RAL T +K+ +D AK + L CK +++
Sbjct: 649 LARLQRGVARKALRALCTQRKKSLDRIAKLEKDRDYLRCKLDRM 692
>04_03_0554 -
17075142-17075159,17075788-17076591,17076619-17076719,
17077095-17077751,17077827-17078768,17078837-17078896,
17079131-17079763,17079886-17079942,17080177-17080702
Length = 1265
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 81 IEAKFYSEVHALECKYEKLYKPLFEKRAEIVN 176
+E FY + +LE +Y + + L+E+ E+VN
Sbjct: 577 LELYFYDDDPSLEHRYRRCRQELYEQDQEVVN 608
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 9 LASLPPNV-RKRIRALRTLQKQFVDIEAKFYSEVHALECKYEKL 137
LA L V RK +RAL T +K+ +D AK + L CK +++
Sbjct: 649 LARLQRGVARKALRALCTRRKKSLDRIAKLEKDRDYLRCKLDRM 692
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/43 (20%), Positives = 23/43 (53%)
Frame = -1
Query: 132 SRICIPERELHCRI*PQCPRTVFVMFAERVYVYAHWVVETPAS 4
+R+C P++ L+ P C +++ +F + H ++ T ++
Sbjct: 265 ARLCKPKKSLNTTDAPHCRQSILRLFGQAAMGTMHGIINTASA 307
>02_05_0728 -
31267653-31267838,31268281-31268627,31268732-31268814,
31269019-31269101
Length = 232
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 182 YAVHYFSALFKQWFI*LLVFAFQSVNFTVEFSLNVHELFL 63
Y+ H LF+ W + L+ FT FS +VH F+
Sbjct: 15 YSFHEEENLFQDWSLDYLLLGEDEPFFTHHFSTSVHSNFV 54
>05_03_0238 - 10783451-10783735,10784686-10785762
Length = 453
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 54 RTLQKQFVDIEAKFYSEVHALECKYEKLYKPLFEKR 161
R + KQF D K ++ ALE K +KL K L E R
Sbjct: 187 RDITKQFEDKGNKLEIKMKALEGKTDKLDKSLAELR 222
>11_06_0550 + 24879074-24881290
Length = 738
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 49 LCEHYKNSSWTLRLNSTVKFTLWNANTRSYINHCLK 156
LCE ++ S T+ ++ + T N + YI+HCLK
Sbjct: 311 LCECLRSLSITIFPSTKGEGTPSNGDLPQYISHCLK 346
>10_05_0119 +
9351951-9352047,9352336-9352361,9353555-9353791,
9355042-9355344
Length = 220
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 203 LFLCWFIYAVHYFSALFKQWFI*LLVFAFQSVNFTVEFSLN 81
L+L W + + F A+ QW + + + S+NF+V N
Sbjct: 166 LYLPWGFWDLVAFQAVIDQWLFRMSFWEWISLNFSVILIFN 206
>09_04_0076 + 14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 9 LASLPPNVRKRIRALRTLQKQFVDIEAKFYSEVHALECKYEK 134
LASLP + RI +RT K+ ++++ Y++ L+ Y K
Sbjct: 1411 LASLPIQAKHRINCIRTAIKRNMEVQNFAYAK-QMLDLLYSK 1451
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 25.8 bits (54), Expect = 4.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 212 VQALFLCWFIYAVHYFS 162
+++ FL WF+Y +YF+
Sbjct: 311 IRSTFLLWFVYLANYFA 327
>04_04_0296 +
24216284-24216428,24216631-24216745,24217321-24217411,
24217495-24217640,24217745-24217964,24218037-24218145,
24218273-24218441,24218546-24218720
Length = 389
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 72 FVDIEAKFYSEVHALECKYEKLYKPLFEKRAEIVNGIYEPT 194
F+D+E + L CK +K+ L R + N Y+ T
Sbjct: 329 FIDLELSRFIAAGKLHCKIDKVACVLETNRPDARNAFYQAT 369
>11_06_0033 -
19437746-19437916,19438063-19438145,19438266-19438359,
19438478-19438551,19438825-19438861,19440767-19440844,
19440927-19441022,19441719-19441815,19441910-19442015,
19442136-19442208,19442537-19442680,19443241-19443681
Length = 497
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 125 FAFQSVNFTVEFSLNVHELFL*C 57
FA+ N+T LN+ ELFL C
Sbjct: 370 FAYDPYNYTFMRQLNILELFLDC 392
>09_01_0040 + 744733-745269
Length = 178
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 4 RGWRLYHPMCVNVYALCEHYKNSSW 78
RG RL+ P + + LC H ++W
Sbjct: 40 RGHRLFAPFVLGLIVLCGHAPPNNW 64
>07_01_0346 -
2501825-2501908,2502143-2502244,2502623-2502646,
2502693-2502819,2503122-2505109,2505804-2505821
Length = 780
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +3
Query: 36 KRIRALRTLQKQFVDIEAKFYSEVHALECKYEKLYKPLFEKRAEIVNGI 182
KR+ L +LQ++ ++ KF E +L KY+ ++PL +K EI++ +
Sbjct: 346 KRLHEL-SLQEKTEEL-FKFKREKGSLALKYDPEFEPLRKKVPEIISRV 392
>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
Length = 946
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 9 LASLPPNV-RKRIRALRTLQKQFVDIEAKFYSEVHALECKYEKL 137
LA L V RK +RAL T +K+ +D K + L CK +++
Sbjct: 650 LARLQRGVARKALRALCTRRKKSLDRITKLEKDRDYLRCKLDRM 693
>07_03_0938 + 22754244-22755569
Length = 441
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 200 FLCWFIYAVHYFSALF 153
FL F+ A+HY+SALF
Sbjct: 295 FLGRFVEALHYYSALF 310
>06_03_0434 +
20725996-20726026,20726300-20726947,20727168-20727230,
20727300-20727458,20727750-20728247,20729068-20729321,
20729448-20729829,20729938-20730204,20730530-20730789
Length = 853
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +3
Query: 27 NVRKRIRALRTLQK-QFVD---IEAKFYSEVHALECKYEKLYKPLFEKRAEIV 173
N+ +R L+ ++ +F D ++ FY + +LE +Y + + L+E+ +++
Sbjct: 283 NIPQRTHMLKPVENCEFCDPKHLQLYFYDDDPSLEHRYRRCHPELYEQDKDVI 335
>05_06_0039 +
25113409-25113522,25113827-25113915,25114013-25114148,
25114231-25114305,25114456-25114577,25114680-25114755,
25115242-25115301,25115383-25115511
Length = 266
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 230 RFIPPGVQALFLCWFIYAVHYFSALFKQWFI 138
R++ GV A+FL W + + F LF Q F+
Sbjct: 191 RYVVNGV-AMFLTWLVARIILFMYLFYQIFL 220
>01_06_0250 + 27876358-27879261
Length = 967
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 76 WTLRLNSTVKFTLWNAN 126
WT+R S V LWNAN
Sbjct: 383 WTIRDRSIVAGLLWNAN 399
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,665,283
Number of Sequences: 37544
Number of extensions: 111914
Number of successful extensions: 348
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 57
effective length of database: 12,653,340
effective search space used: 265720140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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